Protein Overview: gi|192283315, gi...

General Information:
Name(s) found:	gi\|192289566 [NCBI NR] gi\|192283315 [NCBI NR]
Description(s) found: Found 2 descriptions. SHOW ALL	gi\|192289566\|ref\|YP_001990171.1\| Ni/Fe-hydrogenase, b-type cytochrome subunit [Rhodopseudomonas palustris TIE-1] [NCBI NR] gi\|192283315\|gb\|ACE99695.1\| Ni/Fe-hydrogenase, b-type cytochrome subunit [Rhodopseudomonas palustris TIE-1] [NCBI NR]
Organism:	Rhodopseudomonas palustris TIE-1
Length:	242 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTEIARVQG AIDSAGERAR SLQTVYVYQA PVRLWHWVNA LLIVALCVTG YLIGSPPPSV  60
   61 PGEASASFQM GYIRFIHFAS GQTLIVFFIL RAYWAIVGNK YSKQLFYMPI TNRTWWWGMI 120
  121 YEFKWYAFLV RDPKKYIGHN PLAHVAMFTF MLFMIFMMCS GMALYAEGQG IDSWQYKMFG 180
  181 FMFWIFPNSQ DLHTVHHLGM WAIVVFVIVH IYAAVREDIL SRQSMISSII SGERLFRDDL 240
  241 PD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..242]	PSI-BLAST	24.09691	Formate dehydrogenase N, cytochrome (gamma) subunit

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
hydrogen ion transmembrane transporter activity	4.29455986972274	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	4.14658254808421	bayes_pls_golite062009
ubiquinol-cytochrome-c reductase activity	3.64153536514168	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor	3.64153536514168	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	3.50341532760587	bayes_pls_golite062009
cation transmembrane transporter activity	3.24971217721974	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors	3.24610027021932	bayes_pls_golite062009
ion transmembrane transporter activity	3.0416933490072	bayes_pls_golite062009
electron carrier activity	2.51878542975969	bayes_pls_golite062009
oxidoreductase activity	1.7836019763102	bayes_pls_golite062009
formate dehydrogenase activity	1.59045445940899	bayes_pls_golite062009
catalytic activity	1.19342057724506	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.173080554590997	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	0.146687943468395	bayes_pls_golite062009
substrate-specific transporter activity	0.0890676728517352	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors	0.0525552238787478	bayes_pls_golite062009
binding	0.00724604692107611	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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