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Protein Overview: gi|162318496

General Information:
Name(s) found: gi|162318496 [NCBI NR]
Description(s) found:
  • gi|162318496|gb|AAI56215.1| Chromosome 21 open reading frame 66 [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 917 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRKARRVNV RKRNDSEEEE RERDEEQEPP PLLPPPGTGE EAGPGGGDRA PGGESLLGPG  60
   61 PSPPSALTPG LGAEAGGGFP GGAEPGNGLK PRKRPRENKE VPRASLLSFQ DEEEENEEVF 120
  121 KVKKSSYSKK IVKLLKKEYK EDLEKSKIKT ELNSSAESEQ PLDKTGHVKD TNQEDGVIIS 180
  181 EHGEDEMDME SEKEEEKPKT GGAFSNALSS LNVLRPGEIP DAAFIHAARK KRQMARELGD 240
  241 FTPHDNEPGK GRLVREDEND ASDDEDDDEK RRIVFSVKEK SQRQKIAEEI GIEGSDDDAL 300
  301 VTGEQDEELS RWEQEQIRKG INIPQVQASQ PAEVNMYYQN TYQTMPYGSS YGIPYSYTAY 360
  361 GSSDAKSQKT DNTVPFKTPS NEMTPVTIDL VKKQLKDRLD SMKELHKTNR QQHEKHLQSR 420
  421 VDSTRAIERL EGSSGGIGER YKFLQEMRGY VQDLLECFSE KVPLINELES AIHQLYKQRA 480
  481 SRLVQRRQDD IKDESSEFSS HSNKALMAPN LDSFGRDRAL YQEHAKRRIA EREARRTRRR 540
  541 QAREQTGKMA DHLEGLSSDD EETSTDITNF NLEKDRISKE SGKVFEDVLE SFYSIDCIKS 600
  601 QFEAWRSKYY TSYKDAYIGL CLPKLFNPLI RLQLLTWTPL EAKCRDFENM LWFESLLFYG 660
  661 CEEREQEKDD VDVALLPTIV EKVILPKLTV IAENMWDPFS TTQTSRMVGI TLKLINGYPS 720
  721 VVNAENKNTQ VYLKALLLRM RRTLDDDVFM PLYPKNVLEN KNSGPYLFFQ RQFWSSVKLL 780
  781 GNFLQWYGIF SNKTLQELSI DGLLNRYILM AFQNSEYGDD SIKKAQNVIN CFPKQWFMNL 840
  841 KGERTISQLE NFCRYLVHLA DTIYRNSIGC SDVEKRNARE NIKQIVKLLA SVRALDHAMS 900
  901 VASDHNVKEF KSLIEGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] PSI-BLAST 5.522879 No description for 1y0fA was found.
    2 View Details [211..619] PSI-BLAST 6.522879 Heavy meromyosin subfragment
    3 View Details [620..813] MSA 1.043982 View MSA. No confident structure predictions are available.
    4 View Details [814..917] MSA 1.035958 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle