| Protein: | gi|162318496 |
| Organism: | synthetic construct |
| Length: | 917 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|162318496.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..917] | [1..917] |
|
|
0.0 | [1..917] | [142..1062] |
|
|
0.0 | [1..917] | [1..917] |
|
|
0.0 | [1..917] | [53..971] |
|
|
0.0 | [1..917] | [1..918] |
|
|
0.0 | [132..917] | [1..786] |
|
Region A: Residues: [1-210] |
1 11 21 31 41 51
| | | | | |
1 MFRKARRVNV RKRNDSEEEE RERDEEQEPP PLLPPPGTGE EAGPGGGDRA PGGESLLGPG 60
61 PSPPSALTPG LGAEAGGGFP GGAEPGNGLK PRKRPRENKE VPRASLLSFQ DEEEENEEVF 120
121 KVKKSSYSKK IVKLLKKEYK EDLEKSKIKT ELNSSAESEQ PLDKTGHVKD TNQEDGVIIS 180
181 EHGEDEMDME SEKEEEKPKT GGAFSNALSS
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [211-619] |
1 11 21 31 41 51
| | | | | |
1 LNVLRPGEIP DAAFIHAARK KRQMARELGD FTPHDNEPGK GRLVREDEND ASDDEDDDEK 60
61 RRIVFSVKEK SQRQKIAEEI GIEGSDDDAL VTGEQDEELS RWEQEQIRKG INIPQVQASQ 120
121 PAEVNMYYQN TYQTMPYGSS YGIPYSYTAY GSSDAKSQKT DNTVPFKTPS NEMTPVTIDL 180
181 VKKQLKDRLD SMKELHKTNR QQHEKHLQSR VDSTRAIERL EGSSGGIGER YKFLQEMRGY 240
241 VQDLLECFSE KVPLINELES AIHQLYKQRA SRLVQRRQDD IKDESSEFSS HSNKALMAPN 300
301 LDSFGRDRAL YQEHAKRRIA EREARRTRRR QAREQTGKMA DHLEGLSSDD EETSTDITNF 360
361 NLEKDRISKE SGKVFEDVLE SFYSIDCIKS QFEAWRSKYY TSYKDAYIG
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [620-813] |
1 11 21 31 41 51
| | | | | |
1 LCLPKLFNPL IRLQLLTWTP LEAKCRDFEN MLWFESLLFY GCEEREQEKD DVDVALLPTI 60
61 VEKVILPKLT VIAENMWDPF STTQTSRMVG ITLKLINGYP SVVNAENKNT QVYLKALLLR 120
121 MRRTLDDDVF MPLYPKNVLE NKNSGPYLFF QRQFWSSVKL LGNFLQWYGI FSNKTLQELS 180
181 IDGLLNRYIL MAFQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [814-917] |
1 11 21 31 41 51
| | | | | |
1 NSEYGDDSIK KAQNVINCFP KQWFMNLKGE RTISQLENFC RYLVHLADTI YRNSIGCSDV 60
61 EKRNARENIK QIVKLLASVR ALDHAMSVAS DHNVKEFKSL IEGK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.936 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
