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Protein Overview: gi|224467806, gi...

General Information:
Name(s) found: gi|224583279 [NCBI NR]
gi|224467806 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|224583279|ref|YP_002637077.1| putative helicase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] [NCBI NR]
  • gi|224467806|gb|ACN45636.1| putative helicase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594
    Length: 586 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFTLRPYQQ EAVDATLSHF RRHRTPAVIV LPTGAGKSLV IAELARVARG RVLVLAHVKE  60
   61 LVAQNHAKYC ALGLEADIFA AGLKRKESQG KVVFGSVQSV ARNLDAFQEE FSLLIVDECH 120
  121 RIGDDEDSQY QQILTHLSKV NPHLRLLGLT ATPFRLGKGW IYQFHYHGMV RGNDNALFRD 180
  181 CIYELPLRYM IKHGYLTPPE RLDMPVVQYD FSRLQAQSNG LFSEADLNRE LKKQQRITPH 240
  241 IISQIMEFAQ TRKGVMIFAA TVEHAKEIVG LLPADDAALI TGDTPGPERD ALIDNFKAQR 300
  301 FRYLVNVSVL TTGFDAPHVD LIAILRPTES VSLYQQIVGR GLRLAPGKTD CLILDYAGNP 360
  361 HDLYAPEVGS PKGKSDNVPV QVFCPACGFA NTFWGKTTAD GTLIEHFGRR CQGWFEDDDG 420
  421 HREQCDFRFR FKNCPQCNAE NDIAARRCRE CDAILVDPDD MLKAALRLKD ALVLRCSGMT 480
  481 MQHGQDEKGE WLKITYYDED GADVSERFRL HTPAQRTAFE QLFIRPHTRT PGVPLRWITA 540
  541 ADIVAQQALL RHPDFVVARM KGQYWQVREK VFDYEGRFRR AHELRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..586] PSI-BLAST 46.69897 Structure of the RecQ Catalytic Core

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009
  • hydrolase activity
    		•  0.226001870533921 bayes_pls_golite062009
  • transcription factor activity
    		•  0.219681379631971 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle