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Protein Overview: gi|220949572

General Information:
Name(s) found: gi|220949572 [NCBI NR]
Description(s) found:
  • gi|220949572|gb|ACL87329.1| fh-PA [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 190 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAGRLMVRS IVGRACLATM GRWSKPQAHA SQVILPSTPA IAAVAIQCEE FTANRRLFSS  60
   61 QIETESTLDG ATYERVCSDT LDALCDYFEE LTENASELQG TDVAYSDGVL TVNLGGQHGT 120
  121 YVINRQTPNK QIWLSSPTSG PKRYDFVGTV AAGRWIYKHS GQSLHELLQQ EIPGILKSQS 180
  181 VDFLRLPYCS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] PSI-BLAST 43.154902 C-terminal domain of frataxin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ferric iron binding
    		•  3.17697632477325 bayes_pls_golite062009
  • iron chaperone activity
    		•  3.06653945752385 bayes_pls_golite062009
  • iron ion binding
    		•  2.78584553912929 bayes_pls_golite062009
  • metallochaperone activity
    		•  1.67572555512957 bayes_pls_golite062009
  • ferrous iron binding
    		•  1.61332056179381 bayes_pls_golite062009
  • binding
    		•  1.55331726001774 bayes_pls_golite062009
  • transition metal ion binding
    		•  1.42179197342125 bayes_pls_golite062009
  • cation binding
    		•  1.42164579673909 bayes_pls_golite062009
  • metal ion binding
    		•  1.42164579673909 bayes_pls_golite062009
  • ion binding
    		•  1.4150396069236 bayes_pls_golite062009
  • protein binding
    		•  0.356112453590986 bayes_pls_golite062009
  • ferroxidase activity
    		•  0.310374472796773 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  0.310374472796773 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle