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Protein Overview: DPOD2_ORYSJ

General Information:
Name(s) found: DPOD2_ORYSJ [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica GN=POLD2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 429 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERKQAEYSN LDERYAIQGE KYQGQQYSHI YFTRLHHMRN LLHALVPSWK PHLPVTTVLG  60
   61 LEEGKDCIIV GTLYKHMKLK PSILDEYSKE RSAIPLVKPH NFMHPDDHLI LEDESGRVTL 120
  121 AGAIPPAAYV TGVVIALHGK ETSAGNFLVE DILEAGIPPQ ITLPSINEDK YVVFVSGLSI 180
  181 GSEKFNPLQF QLLIDHITGH LGDENEQSIA SNIVRVVVAG NSVHISPRFF NGQAVASKDQ 240
  241 SRIAEPIKEL DIMLTQLVAS LPVDMMPGSN DPANFSLPQQ PLHRCLFAGA ATYNTFSSCS 300
  301 NPHQFELDSV RFIGTSGQNI DDLYKYSDAK DKLEFVERTL RWRHLAPTAP NSLGCYPYTD 360
  361 KDPFLVESCP HVYFVGNQDK YETQLLQGLE KQKVRLICIP RFCDSGVAVM LNLRNLECST 420
  421 LSFSTSFDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] MSA 3.18999 View MSA. No confident structure predictions are available.
    2 View Details [170..429] FFAS03 1.58 No description for 2yvtA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  2.89784024382425 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  2.54644459918406 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.75775204356118 bayes_pls_golite062009
  • transferase activity
    		•  1.71554219929081 bayes_pls_golite062009
  • binding
    		•  1.30309680165893 bayes_pls_golite062009
  • catalytic activity
    		•  1.30037658165549 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  1.17916462117542 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.950264524479969 bayes_pls_golite062009
  • phosphatase activity
    		•  0.829761417192212 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  0.768201004870964 bayes_pls_golite062009
  • structural molecule activity
    		•  0.211411396269789 bayes_pls_golite062009
  • protein binding
    		•  0.20380491058914 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle