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Protein Overview: gi|197248550, gi...

General Information:
Name(s) found: gi|197248550 [NCBI NR]
gi|197212253 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|197248550|ref|YP_002148070.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] [NCBI NR]
  • gi|197212253|gb|ACH49650.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Agona str. SL483
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRDFIKAA SGGALLLGAA PSVSHAAAEN RPPIPGSLGM LYDSTLCVGC QACVTKCQDI  60
   61 NFPARNPEGE QTWSNNDKLS PYTNNIIQVW RSGTGVNKDQ EENGYAYIKK QCMHCVDPNC 120
  121 VSVCPVSALK KDPKTGIVHY DKDVCTGCRY CMVACPYNVP KYDYNNPFGA LHKCELCNQK 180
  181 GVERLDKGGL PGCVEVCPAG AVIFGTREEL MAEAKKRLAL KPGSEYHYPR QTLKTDDTYL 240
  241 HTVPKYYPHL YGEKEGGGTQ VLVLTGVPYE DLDLPKLDDL STGARSEHVQ HTLYKGMILP 300
  301 LAALAGLTVL VRRNSKNDHH DGGDDHES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 44.69897 Formate dehydrogenase N, iron-sulfur (beta) subunit; Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • formate dehydrogenase activity
    		•  10.9674358961972 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
    		•  7.27554333181693 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  6.49651154487804 bayes_pls_golite062009
  • metal cluster binding
    		•  6.49651154487804 bayes_pls_golite062009
  • oxidoreductase activity
    		•  5.98361135786786 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  5.77927347135001 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  5.39747453448396 bayes_pls_golite062009
  • electron carrier activity
    		•  5.05393703018095 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  3.13953145151561 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  2.76338281383262 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  2.70037803782769 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.09041948600744 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.80621486978907 bayes_pls_golite062009
  • catalytic activity
    		•  0.488483980994331 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle