Protein Overview: gi|213586799

General Information:
Name(s) found:	gi\|213586799 [NCBI NR]
Description(s) found:	gi\|213586799\|ref\|ZP_03368625.1\| formate dehydrogenase-O beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] [NCBI NR]
Organism:	Salmonella enterica subsp. enterica serovar Typhi str. E98-0664
Length:	300 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYQSQDIIR RSATNGFTPA PQARDHQEEV AKLIDVTTCI GCKACQVACS EWNDIRDEVG  60
   61 NNVGVYDNPA DLTAKSWTVM RFSEVEQNDK LEWLIRKDGC MHCADPGCLK ACPAEGAIIQ 120
  121 YANGIVDFQS EQCIGCGYCI AGCPFNVPRL NPEDNRVYKC TLCVDCVVVG QEPACVKTCP 180
  181 TGAIHFGSKE DMKTLAGERV AELKTRGYDN AGLYDPAGVG GTHVMYVLHH ADKPNLYHGL 240
  241 PENPEISETV KFWKGVWKPL AAFGFAATFA ASVFHYVGVG PNRAEEEDDN LHEEKDEVRK 300
  301

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..300]	PSI-BLAST	69.69897	Formate dehydrogenase N, iron-sulfur (beta) subunit; Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
formate dehydrogenase activity	10.9674358961972	bayes_pls_golite062009
oxidoreductase activity	5.98361135786786	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.77927347135001	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors	5.39747453448396	bayes_pls_golite062009
electron carrier activity	5.05393703018095	bayes_pls_golite062009
NADH dehydrogenase activity	3.13953145151561	bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity	2.76338281383262	bayes_pls_golite062009
NADH dehydrogenase (quinone) activity	2.70037803782769	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor	2.09041948600744	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH	1.80621486978907	bayes_pls_golite062009
4 iron, 4 sulfur cluster binding	1.5619384041388	bayes_pls_golite062009
iron-sulfur cluster binding	1.30496569995148	bayes_pls_golite062009
metal cluster binding	1.30496569995148	bayes_pls_golite062009
catalytic activity	0.488483980994331	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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