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Protein Overview: gi|169749961, gi...

General Information:
Name(s) found: gi|170023427 [NCBI NR]
gi|169749961 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|170023427|ref|YP_001719932.1| L-aspartate oxidase [Yersinia pseudotuberculosis YPIII] [NCBI NR]
  • gi|169749961|gb|ACA67479.1| L-aspartate oxidase [Yersinia pseudotuberculosis YPIII] [NCBI NR]
    • Organism: Yersinia pseudotuberculosis YPIII
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPTLLLHTS YDMQSSSEHI SDVLIIGSGA AGLSLALRLA PHCKVTVLSK GPLNEGATFY  60
   61 AQGGIAAVFD ETDSISSHVD DTLIAGAGLC DKEAVEFIAS NARSCVQWLI DQGVLFDTET 120
  121 SANGEERYHL TREGGHSHRR ILHTADATGK EVETTLVGKA SNHPNISVKE RCNAVDLITS 180
  181 NKIGLAGTKR VVGAYVWNRE LEKVETFRAK AVVLATGGAA KVYQYTTNPD ISSGDGIAMA 240
  241 WRAGCRVANL EFNQFHPTCL FHPQARNFLL TEALRGEGAY LKRPDGSRFM LDFDPRGELA 300
  301 PRDIVARAID HEMKRLGADC MYLDISHKPT DFVMQHFPMI YEKLLSLGID LTKEAIPIVP 360
  361 AAHYTCGGVM VDQHGRTDLD GLYAIGEVSY TGLHGANRMA SNSLLECLVY GWSAAEDILT 420
  421 RLPTAKLAKH LPDWDESRVD NSDERVVIQH NWHELRLFMW DYVGIVRTTK RLERALRRIN 480
  481 TLQQEIDEYY ANFRISNNLL ELRNLVQVAE LIVRCAMERK ESRGLHYTLD YPDQIENPQP 540
  541 TILHP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..545] PSI-BLAST 131.0 L-aspartate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • succinate dehydrogenase activity
    		•  10.1355816274563 bayes_pls_golite062009
  • L-aspartate oxidase activity
    		•  7.97437641217089 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  7.4746833070215 bayes_pls_golite062009
  • aspartate oxidase activity
    		•  7.32727957948448 bayes_pls_golite062009
  • succinate dehydrogenase (ubiquinone) activity
    		•  7.26739070786089 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor
    		•  7.26739070786089 bayes_pls_golite062009
  • oxidoreductase activity
    		•  6.1068533307878 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  5.74880353813045 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  5.00880700655468 bayes_pls_golite062009
  • electron carrier activity
    		•  2.8553929424231 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  2.26549080531565 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  2.16428165652808 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  2.11247286526577 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  1.91979117253135 bayes_pls_golite062009
  • catalytic activity
    		•  1.75556359035561 bayes_pls_golite062009
  • binding
    		•  1.41440014472974 bayes_pls_golite062009
  • transporter activity
    		•  0.890824576391732 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.798505263716232 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.706117386114413 bayes_pls_golite062009
  • fumarate reductase (NADH) activity
    		•  0.65260793370113 bayes_pls_golite062009
  • FAD binding
    		•  0.503028015880333 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.491481205015383 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  0.468246082354334 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.26114823844682 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.224438371728402 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.164825358655637 bayes_pls_golite062009
  • protein binding
    		•  0.159209309982354 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle