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Protein Overview: gi|221319625

General Information:
Name(s) found: gi|221319625 [NCBI NR]
Description(s) found:
  • gi|221319625|ref|ZP_03600919.1| glycine dehydrogenase subunit 2 [Bacillus subtilis subsp. subtilis str. JH642] [NCBI NR]
    • Organism: Bacillus subtilis subsp. subtilis str. JH642
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQDQALIF ELSREGRIGY SLPELDVPEI ELGDLLSDTY IRDEDAALPE VSELDIMRHY  60
   61 TALSKRNHGV DSGFYPLGSC TMKYNPKINE KIARIPGFAA IHPLQDEDTV QGALELLYDL 120
  121 SKHLEEITGM DEVTLQPAAG AHGEWTGLMM IRAYHEARGD FKRTKVIVPD SAHGTNPASA 180
  181 TVAGFETVTV KSNEKGLVDL EDLKRAVNEE TAALMLTNPN TLGLFEEQIT EMAEIVHQAG 240
  241 GKLYYDGANL NAVLSKARPG DMGFDVVHLN LHKTFTGPHG GGGPGSGPVG VKQDLIPYLP 300
  301 KPVLVKKEGR FTFDYDRPHA IGRVKPYYGN FGINVRAYTY IRSMGPDGLK AVTENAVLNA 360
  361 NYMMRKLAPY YDLPFDRHCK HEFVLSGKRQ KKLGVRTLDI AKRLLDFGYH PPTIYFPLNV 420
  421 EECIMIEPTE TESKETLDAF IDAMIQIAKE AEENPELVQE APHTTIVKRM DETKAARHPV 480
  481 LRYEAEER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 87.30103 Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.66922865456094 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  2.10290066978837 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  2.10290066978837 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.85532625717753 bayes_pls_golite062009
  • transaminase activity
    		•  1.83482013760414 bayes_pls_golite062009
  • transferase activity
    		•  0.93810038069762 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.71980637947887 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.58373273750311 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.51745245786841 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.38671377495281 bayes_pls_golite062009
  • lyase activity
    		•  0.0414385380659299 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle