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Protein Overview: gi|190406917

General Information:
Name(s) found: gi|190406917 [NCBI NR]
Description(s) found:
  • gi|190406917|gb|EDV10184.1| C-4 sterol methyl oxidase [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVFNNATL SGLVQASTYS QTLQNVAHYQ PQLNFMEKYW AAWYSYMNND VLATGLMFFL  60
   61 LHEFMYFFRC LPWFIIDQIP YFRRWKLQPT KIPSAKEQLY CLKSVLLSHF LVEAIPIWTF 120
  121 HPMCEKLGIT VEVPFPSLKT MALEIGLFFV LEDTWHYWAH RLFHYGVFYK YIHKQHHRYA 180
  181 APFGLSAEYA HPAETLSLGF GTVGMPILYV MYTGKLHLFT LCVWITLRLF QAVDSHSGYD 240
  241 FPWSLNKIMP FWAGAEHHDL HHHYFIGNYA SSFRWWDYCL DTESGPEAKA SREERMKKRA 300
  301 ENNAQKKTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] Pfam 107.958607 Sterol desaturase No confident structure predictions are available.
    2 View Details [87..180] MSA 1.482995 View MSA. No confident structure predictions are available.
    3 View Details [181..309] FFAS03 1.01 No description for 2f5kA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  2.10787756282836 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.56029029012385 bayes_pls_golite062009
  • chromatin binding
    		•  1.51511928418505 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.991756552156335 bayes_pls_golite062009
  • protein binding
    		•  0.759327550978008 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.57519986764207 bayes_pls_golite062009
  • DNA binding
    		•  0.293109488455755 bayes_pls_golite062009
  • catalytic activity
    		•  0.168308115787289 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle