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Protein Overview: gi|190408260

General Information:
Name(s) found: gi|190408260 [NCBI NR]
Description(s) found:
  • gi|190408260|gb|EDV11525.1| metal-binding transcriptional activator [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 417 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIFNGNKYA CASCIRGHRS STCRHSHRML IKVRTRGRPS PMAIRDAILV DSTSQSTEYE  60
   61 NGAQIEGDCC SAMNQQPILF VRASAVRKAR MINGKLHILM EEGFTAHEPK DISTFTDDGN 120
  121 KYITETEFLR KHSPKAPATG TISPDSTKSS SSSEKKERSR LQQEPIRHFS NCCKKDKSQN 180
  181 PASNGKTNKA PSDDIFTPYG SLESTSAFND ILQENYNSSV PGAHDSSETL TPQSTTTIAA 240
  241 PHSSDVASKV EVLTHKGIFL STQCSCEDES CPCVNCLIHR SEEELNSYIQ QSGVPLTNIG 300
  301 EAQITDKMMD YLDDCKCTDK ECICPPDNCT CDGCFSHSTN IIPFEKFFFY GILNARLTRK 360
  361 TQIKFKGKLV PSKYWWDFLK LQVPLMTDAQ LELLDIHAWF QKLVSNYAPH LSDATTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] PSI-BLAST 65.703922 Zinc domain conserved in yeast copper-regulated transcription factors
    2 View Details [62..417] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA polymerase II transcription factor activity
    		•  3.46199909835403 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.44900037030135 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  2.99240619437226 bayes_pls_golite062009
  • binding
    		•  2.00508289492248 bayes_pls_golite062009
  • ligand-regulated transcription factor activity
    		•  0.749213234767051 bayes_pls_golite062009
  • cation binding
    		•  0.0994209760375689 bayes_pls_golite062009
  • metal ion binding
    		•  0.0994209760375689 bayes_pls_golite062009
  • ion binding
    		•  0.0960196890797145 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle