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Protein Overview: gi|190407879

General Information:
Name(s) found: gi|190407879 [NCBI NR]
Description(s) found:
  • gi|190407879|gb|EDV11144.1| hypothetical protein SCRG_02420 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 754 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHEKFSIPE NFTLAQSLQL LYSVVKNQYK NLADLIINSK GNKDTVTYGK IHKNLDTLLV  60
   61 YVNEGLRKIE KTYTLKKGLG NLVVDHPELR SIIEDFQILG QDIRIARRKA ETLMAEGNGS 120
  121 PSLSSSSSVL GLGTGNGLRF PKLWRMGSKR DKLKEADEKE AKINKQADNI RRARKLEEEK 180
  181 KLGAKLQYER DLELQREKLI ELKVKEKVEF EVAQKLEEER VKREEEERKH REQAEKKRIS 240
  241 TLKHERKTNY KSRASLDNFS SSSKSSGKID NSLIKRRSLD VVRTSGERVR TPVRKSMEAA 300
  301 EIGMAAQLAW SQYQNGANHS KVSNNGSHSN ELQIRYKPTP PLKKRYDYKK PTVNRPIIKS 360
  361 PTLNRQNSKS SRNIPTNSKL KASKSNTNKV SRRNEQNLEP SSPVLVSATA VPAESKPMRS 420
  421 KSGTPDKESS ASSSLDSRKE DILKSVQGVD RNACEQILNE ILVTDEKVYW EDIAGLRNAK 480
  481 NSLKEAVVYP FLRPDLFKGL REPVRGMLLF GPPGTGKTMI AKAVATESNS TFFSVSASSL 540
  541 LSKYLGESEK LVRALFYMAK KLSPSIIFID EIDSMLTARS DNENESSRRI KTELLIQWSS 600
  601 LSSATAQSED RNNTLDSRVL VLGATNLPWA IDDAARRRFS RKLYIPLPDY ETRLYHLKRL 660
  661 MAKQKNSLQD LDYELITEMT EGFSGSDLTS LAKEAAMEPI RDLGDKLMFA DFDKIRGIEI 720
  721 KDFQNALLTI KKSVSSESLQ KYEEWSSKFG SNGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] MSA 2.109996 View MSA. No confident structure predictions are available.
    2 View Details [216..374] PSI-BLAST 43.927757 N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules
    3 View Details [375..518] PSI-BLAST 43.927757 N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules
    4 View Details [519..647] PSI-BLAST 482.24799 Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc
    5 View Details [648..754] PSI-BLAST 482.24799 Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle