Protein Overview: gi|190409811

General Information:
Name(s) found:	gi\|190409811 [NCBI NR]
Description(s) found:	gi\|190409811\|gb\|EDV13076.1\| cruciform cutting endonuclease [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
Organism:	Saccharomyces cerevisiae RM11-1a
Length:	353 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAQKAKIL QLIDSCCQNA KSTQLKSLSF VIGAVNGTTK EAKRTYIQEQ CEFLEKLRQQ  60
   61 KIREGRINIL SMDAGVSNFA FSKMQLLNND PLPKVLDWQK INLEEKFFQN LKKLSLNPAE 120
  121 TSELVFNLTE YLFESMPIPD MFTIERQRTR TMSSRHILDP ILKVNILEQI LFSNLENKMK 180
  181 YTNKIPNTSK LRYMVCSSDP HRMTSYWCIP REETPTSSKK LKSNKHSKDS RIKLVKKILS 240
  241 TSILEGNSTS STKLVEFIGV WNNRIRNALT KKKSFKLCDI LEIQDNSGVR KDDDLADSFL 300
  301 HCLSWMEWLK NYESITELLN SKTLVKTQFG QVFEFCENKV QKLKFLQNTY NND

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..353]	PSI-BLAST	123.38764	Mitochondrial resolvase ydc2 N-terminal domain; Mitochondrial resolvase ydc2 catalytic domain

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
nuclease activity	2.42408996498686	bayes_pls_golite062009
exonuclease activity	2.2254764376369	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	1.75713164321634	bayes_pls_golite062009
hydrolase activity	1.66727833471421	bayes_pls_golite062009
ribonuclease activity	1.41033617404868	bayes_pls_golite062009
catalytic activity	1.25233849524628	bayes_pls_golite062009
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	1.19309748194103	bayes_pls_golite062009
deoxyribonuclease activity	1.1219517187744	bayes_pls_golite062009
3'-5' exonuclease activity	0.72566997912926	bayes_pls_golite062009
DNA polymerase activity	0.717600245625866	bayes_pls_golite062009
endonuclease activity	0.635517699603511	bayes_pls_golite062009
DNA-directed DNA polymerase activity	0.568273228950698	bayes_pls_golite062009
binding	0.332806037334937	bayes_pls_golite062009
exodeoxyribonuclease activity	0.278838342302102	bayes_pls_golite062009
exodeoxyribonuclease activity, producing 5'-phosphomonoesters	0.261428436029202	bayes_pls_golite062009
exoribonuclease activity	0.14466215642144	bayes_pls_golite062009
nucleic acid binding	0.129994528216387	bayes_pls_golite062009
exoribonuclease activity, producing 5'-phosphomonoesters	0.0662718964590603	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle