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Protein Overview: gi|161615115, gi...

General Information:
Name(s) found: gi|161615115 [NCBI NR]
gi|161364479 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|161615115|ref|YP_001589080.1| hypothetical protein SPAB_02882 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] [NCBI NR]
  • gi|161364479|gb|ABX68247.1| hypothetical protein SPAB_02882 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDNSHSSD TVNSKKGFFS LLLSQLFHGE PKNRDELLAL IRDSGQNELI DEDTRDMLEG  60
   61 VMDIADQRVR DIMIPRSQMI TLKRNQTLDE CLDVIIESAH SRFPVISEDK DHIEGILMAK 120
  121 DLLPFMRSDA EAFSMDKVLR TAVVVPESKR VDRMLKEFRS QRYHMAIVID EFGGVSGLVT 180
  181 IEDILELIVG EIEDEYDEED DIDFRQLSRH TWTIRALASI EDFNDAFGTH FSDEEVDTIG 240
  241 GLVMQAFGHL PARGETIDID GYQFKVAMAD SRRIIQVHVR IPDDSPQPKL DE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 39.045757 Inosine monophosphate dehydrogenase (IMPDH); Type II inosine monophosphate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • magnesium ion transmembrane transporter activity
    		•  5.02895256941344 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.30714747153741 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.05832395284653 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.77666157413171 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.5512605628205 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.46421916456482 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.11928485686295 bayes_pls_golite062009
  • transporter activity
    		•  0.666337333933876 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.534933550137003 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.26029124809786 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.0796146522242194 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle