Protein Overview: gi|207347484

General Information:
Name(s) found:	gi\|207347484 [NCBI NR]
Description(s) found:	gi\|207347484\|gb\|EDZ73638.1\| YBR251Wp-like protein [Saccharomyces cerevisiae AWRI1631] [NCBI NR]
Organism:	Saccharomyces cerevisiae AWRI1631
Length:	307 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKRQLSTSV RYLQHYDESL LSRYYPESLL KSIKLAQQTI PEDTKFRVSR NVEFAPPYLD  60
   61 DFTKIHPFWD YKPGMPHLHA QEENNNFSIF RWDQVQQPLP GEGNILPPGV SLPNDGGRKS 120
  121 KSADVAAGLH KQTGVDPDYI TRKLTMKPLV MKRVSNQTGK GKIASFYALV VVGDKNGMVG 180
  181 LGEGKSREEM SKAIFKAHWD AVRNLKEIPR YENRTIYGDI DFRYHGVKLH LRSAKPGFGL 240
  241 RVNHVIFEIC ECAGIKDLSG KVYKSRNDMN IAKGTIEAFT KAQKTLDEVA LGRGKKLVDV 300
  301 RKVYYSS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..136]	MSA	3.128995	View MSA. No confident structure predictions are available.
2	View Details	[137..307]	PSI-BLAST	204.9794	Ribosomal protein S5, C-terminal domain; Ribosomal S5 protein, N-terminal domain

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
structural constituent of ribosome	6.7575603459566	bayes_pls_golite062009
structural molecule activity	6.24187874355454	bayes_pls_golite062009
RNA binding	3.5405508156591	bayes_pls_golite062009
nucleic acid binding	3.06806242310926	bayes_pls_golite062009
binding	2.86619976447436	bayes_pls_golite062009
DNA binding	1.59400162385296	bayes_pls_golite062009
3'-5'-exoribonuclease activity	1.56111033008721	bayes_pls_golite062009
protein binding	1.43319050998069	bayes_pls_golite062009
transcription regulator activity	1.36103792167395	bayes_pls_golite062009
exoribonuclease activity, producing 5'-phosphomonoesters	1.35935222635763	bayes_pls_golite062009
exoribonuclease activity	1.31205157616894	bayes_pls_golite062009
3'-5' exonuclease activity	1.10842504252923	bayes_pls_golite062009
double-stranded RNA binding	0.967560318725736	bayes_pls_golite062009
mRNA binding	0.625703291171316	bayes_pls_golite062009
transcription factor activity	0.442070779997034	bayes_pls_golite062009
cytoskeletal protein binding	0.403469167264307	bayes_pls_golite062009
RNA helicase activity	0.222896865667011	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle