YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|190406174

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..65] PSI-BLAST 504.325697 Spermidine synthase
2 View Details [66..300] PSI-BLAST 504.325697 Spermidine synthase

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • spermidine synthase activity
  • 2.31131562815571 bayes_pls_golite062009
  • transferase activity
  • 1.77671966857605 bayes_pls_golite062009
  • transcription regulator activity
  • 1.61435611638306 bayes_pls_golite062009
  • DNA binding
  • 1.53375495589674 bayes_pls_golite062009
  • nucleic acid binding
  • 1.31440474302645 bayes_pls_golite062009
  • catalytic activity
  • 1.25333584501255 bayes_pls_golite062009
  • binding
  • 0.976078016260105 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 0.837368219068434 bayes_pls_golite062009
  • N-methyltransferase activity
  • 0.69697643153076 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
  • 0.644010137949015 bayes_pls_golite062009
  • methyltransferase activity
  • 0.635463629299812 bayes_pls_golite062009
  • protein methyltransferase activity
  • 0.57386401278889 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle