YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|190409910

General Information:
Name(s) found: gi|190409910 [NCBI NR]
Description(s) found:
  • gi|190409910|gb|EDV13175.1| phosphoenolpyruvate carboxylkinase [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSKMNATV GSTSEVEQKI RQELALSDEV TTIRRNAPAA VLYEDGLKEN KTVISSSGAL  60
   61 IAYSGVKTGR SPKDKRIVEE PTSKDEIWWG PVNKPCSERT WSINRERAAD YLRTRDHIYI 120
  121 VDAFAGWDPK YRIKVRVVCA RAYHALFMTN MLIRPTEEEL AHFGEPDFTV WNAGQFPANL 180
  181 HTQDMSSKST IEINFKAMEM IILGTEYAGE MKKGIFTVMF YLMPVHHNVL TLHSSANQGI 240
  241 QNGDVTLFFG LSGTGKTTLS ADPHRLLIGD DEHCWSDHGV FNIEGGCYAK CINLSAEKEP 300
  301 EIFDAIKFGS VLENVIYDEK SHVVDYDDSS ITENTRCAYP IDYIPSAKIP CLADSHPKNI 360
  361 ILLTCDASGV LPPVSKLTPE QVMYHFISGY TSKMAGTEQG VTEPEPTFSS CFGQPFLALH 420
  421 PIRYATMLAT KMSQHKANAY LINTGWTGSS YVSGGKRCPL KYTRAILDSI HDGSLANETY 480
  481 ETLPIFNLQV PTKVNGVPAE LLNPAKNWSQ GESKYRGAVT NLANLFVQNF KIYQDRATPD 540
  541 VLAAGPQFE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222]
    [284..344]    		 PSI-BLAST 2440.0 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-liase)
    2 View Details [223..283]
    [345..361]
    [391..438]    		 PSI-BLAST 2440.0 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-liase)
    3 View Details [362..390]
    [439..549]    		 PSI-BLAST 2440.0 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-liase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoenolpyruvate carboxykinase activity
    		•  5.427657115096 bayes_pls_golite062009
  • phosphoenolpyruvate carboxykinase (ATP) activity
    		•  4.07297753409796 bayes_pls_golite062009
  • phosphoenolpyruvate carboxykinase (GTP) activity
    		•  3.22045404005498 bayes_pls_golite062009
  • catalytic activity
    		•  1.59551963655826 bayes_pls_golite062009
  • lyase activity
    		•  0.903636804009288 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.63361553348301 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.110170641189915 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle