Protein Overview: DNAJ_SALNS

General Information:
Name(s) found:	DNAJ_SALNS [Swiss-Prot]
Description(s) found: Found 4 descriptions. SHOW ALL	Chaperone protein DnaJ OS=Salmonella newport (strain SL254) GN=dnaJ PE=3 SV=1 [Swiss-Prot]
Organism:	Salmonella enterica subsp. enterica serovar Newport str. SL254
Length:	379 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRDYYEIL GVSKTAEERE IKKAYKRLAM KYHPDRNQGD KEAEAKFKEI KEAYEVLTDA  60
   61 QKRAAYDQYG HAAFEQGGMG GGFGGGFNGG ADFSDIFGDV FGDIFGGGRG RQRAARGADL 120
  121 RYNMDLTLEE AVRGVTKEIR IPTLEECDVC HGSGAKAGTQ PQTCPTCHGS GQVQMRQGFF 180
  181 AVQQTCPHCQ GRGTLIKDPC HKCHGHGRVE KSKTLSVKIP AGVDTGDRIR LAGEGEAGEH 240
  241 GAPAGDLYVQ VQVKQHPIFE REGNNLYCEV PINFAMAALG GEIEVPTLDG RVMLKVPSET 300
  301 QTGKLFRMRG KGVKSVRGGA QGDLLCRVVV ETPVGLSEKQ KQLLKDLQES FGGPTGEKNS 360
  361 PRSKSFFDGV KKFFDDLTR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..116]	PSI-BLAST	26.30103	NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
2	View Details	[117..221]	PSI-BLAST	21.0	Cysteine-rich domain of the chaperone protein DnaJ.
3	View Details	[222..379]	PSI-BLAST	17.69897	Hsp40-Ydj1 dimerization domain

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
unfolded protein binding	3.04403163860617	bayes_pls_golite062009
heat shock protein binding	2.17994194200939	bayes_pls_golite062009
binding	2.03854863870179	bayes_pls_golite062009
chaperone binding	1.61155546076854	bayes_pls_golite062009
protein binding	1.35701123337504	bayes_pls_golite062009
Hsp70 protein binding	0.541755903922701	bayes_pls_golite062009
nucleic acid binding	0.423488346839872	bayes_pls_golite062009
transcription regulator activity	0.146399219759372	bayes_pls_golite062009
catalytic activity	0.106988907594358	bayes_pls_golite062009
DNA binding	0.10307408349439	bayes_pls_golite062009

2

Term	Confidence	Notes
protein disulfide isomerase activity	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups	2.23398279564144	bayes_pls_golite062009
binding	2.13705208493215	bayes_pls_golite062009
unfolded protein binding	2.04158808514315	bayes_pls_golite062009
protein binding	1.32690171510656	bayes_pls_golite062009
catalytic activity	0.276917867171685	bayes_pls_golite062009

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle