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Protein Overview: MYB26_ARATH

General Information:
Name(s) found: MYB26_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|5823327|gb|AAD53102.1|AF175997_1 putative transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|22331071|ref|NP_566467.2| ATMYB26 (MYB DOMAIN PROTEIN 26); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1 [Swiss-Prot]
  • putative transcription factor [Arabidopsis thaliana]gi|22331071|ref|NP_566467.2| myb family transcription factor (MYB26) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB26) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATMYB26, MS35, MYB26 | MYB26 (myb domain protein 26); DNA binding / transcription factor | chr3:4576751-4578034 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB26; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB26, ATMYB26, MS35 | myb domain protein 26 | chr3:4576744-4578027 REVERSE LENGTH=367 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Myb domain protein 26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to gibberellin stimulus [IEP]
    regulation of transcription, DNA-dependent [ISS]
    anther dehiscence [IMP]
    secondary cell wall biogenesis [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGTYTHI HGFCLQRCGK  60
   61 SCRLRWINYL RPDLKRGSFS PQEAALIIEL HSILGNRWAQ IAKHLPGRTD NEVKNFWNSS 120
  121 IKKKLMSHHH HGHHHHHLSS MASLLTNLPY HNGFNPTTVD DESSRFMSNI ITNTNPNFIT 180
  181 PSHLSLPSPH VMTPLMFPTS REGDFKFLTT NNPNQSHHHD NNHYNNLDIL SPTPTINNHH 240
  241 QPSLSSCPHD NNLQWPALPD FPASTISGFQ ETLQDYDDAN KLNVFVTPFN DNAKKLLCGE 300
  301 VLEGKVLSSS SPISQDHGLF LPTTYNFQMT STSDHQHHHR VDSYINHMII PSSSSSSPIS 360
  361 CGQYVIT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 36.69897 CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES
    2 View Details [129..367] FFAS03 1.0 Crystal structure of NimA from D. radiodurans

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.106460697391863 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle