YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: GWD1_ARATH

General Information:
Name(s) found: GWD1_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|57012990|sp|Q9SAC6.2|GWD1_ARATH RecName: Full=Alpha-glucan water dikinase 1, chloroplastic; AltName: Full=Protein starch-related R1; AltName: Full=Protein starch excess 1; Flags: Precursor [NCBI NR]
  • gi|18391200|ref|NP_563877.1| SEX1 (STARCH EXCESS 1); alpha-glucan, water dikinase [Arabidopsis thaliana] [NCBI NR]
  • gi|12044358|gb|AAG47821.1|AF312027_1 SEX1 [Arabidopsis thaliana] [NCBI NR]
  • (Q9SAC6) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (Starch-related R1 protein) (Starch excess protein 1) [Swiss-Prot]
  • Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana GN=GWD1 PE=1 SV=2 [Swiss-Prot]
  • SEX1 [Arabidopsis thaliana]gi|18391200|ref|NP_563877.1| starch excess protein (SEX1) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Alpha-glucan water dikinase, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SOP1, SOP, GWD1, GWD, SEX1 | SEX1 (STARCH EXCESS 1) | chr1:3581211-3590044 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • SEX1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Alpha-glucan water dikinase 1, chloroplast precursor (Protein starch-related R1) (Protein starch excess 1) [nr-271106-contam.fasta]
  • SEX1 (STARCH EXCESS 1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SEX1, SOP1, SOP, GWD1, GWD | Pyruvate phosphate dikinase, PEP/pyruvate binding domain | chr1:3581210-3590043 REVERSE LENGTH=1399 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1399 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    mitochondrion [IDA]
    chloroplast envelope [IDA]
    Biological Process: response to symbiotic fungus [IEP]
    cold acclimation [IMP]
    starch catabolic process [IMP]
    Molecular Function: alpha-glucan, water dikinase activity [IMP][TAS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSVVHNLL NRGLIRPLNF EHQNKLNSSV YQTSTANPAL GKIGRSKLYG KGLKQAGRSL  60
   61 VTETGGRPLS FVPRAVLAMD PQAAEKFSLD GNIDLLVEVT STTVREVNIQ IAYTSDTLFL 120
  121 HWGAILDNKE NWVLPSRSPD RTQNFKNSAL RTPFVKSGGN SHLKLEIDDP AIHAIEFLIF 180
  181 DESRNKWYKN NGQNFHINLP TERNVKQNVS VPEDLVQIQA YLRWERKGKQ MYNPEKEKEE 240
  241 YEAARTELRE EMMRGASVED LRAKLLKKDN SNESPKSNGT SSSGREEKKK VSKQPERKKN 300
  301 YNTDKIQRKG RDLTKLIYKH VADFVEPESK SSSEPRSLTT LEIYAKAKEE QETTPVFSKK 360
  361 TFKLEGSAIL VFVTKLSGKT KIHVATDFKE PVTLHWALSQ KGGEWLDPPS DILPPNSLPV 420
  421 RGAVDTKLTI TSTDLPSPVQ TFELEIEGDS YKGMPFVLNA GERWIKNNDS DFYVDFAKEE 480
  481 KHVQKDYGDG KGTAKHLLDK IADLESEAQK SFMHRFNIAA DLVDEAKSAG QLGFAGILVW 540
  541 MRFMATRQLV WNKNYNVKPR EISKAQDRLT DLLQDVYASY PEYRELLRMI MSTVGRGGEG 600
  601 DVGQRIRDEI LVIQRKNDCK GGIMEEWHQK LHNNTSPDDV VICQALMDYI KSDFDLSVYW 660
  661 KTLNDNGITK ERLLSYDRAI HSEPNFRGEQ KDGLLRDLGH YMRTLKAVHS GADLESAIQN 720
  721 CMGYQDDGEG FMVGVQINPV SGLPSGYPDL LRFVLEHVEE KNVEPLLEGL LEARQELRPL 780
  781 LLKSHDRLKD LLFLDLALDS TVRTAIERGY EQLNDAGPEK IMYFISLVLE NLALSSDDNE 840
  841 DLIYCLKGWQ FALDMCKSKK DHWALYAKSV LDRSRLALAS KAERYLEILQ PSAEYLGSCL 900
  901 GVDQSAVSIF TEEIIRAGSA AALSSLVNRL DPVLRKTANL GSWQVISPVE VVGYVIVVDE 960
  961 LLTVQNKTYD RPTIIVANRV RGEEEIPDGA VAVLTPDMPD VLSHVSVRAR NGKICFATCF1020
 1021 DSGILSDLQG KDGKLLSLQP TSADVVYKEV NDSELSSPSS DNLEDAPPSI SLVKKQFAGR1080
 1081 YAISSEEFTS DLVGAKSRNI GYLKGKVPSW VGIPTSVALP FGVFEKVISE KANQAVNDKL1140
 1141 LVLKKTLDEG DQGALKEIRQ TLLGLVAPPE LVEELKSTMK SSDMPWPGDE GEQRWEQAWA1200
 1201 AIKKVWASKW NERAYFSTRK VKLDHDYLCM AVLVQEVINA DYAFVIHTTN PSSGDSSEIY1260
 1261 AEVVKGLGET LVGAYPGRSL SFICKKNNLD SPLVLGYPSK PIGLFIRRSI IFRSDSNGED1320
 1321 LEGYAGAGLY DSVPMDEEDQ VVLDYTTDPL ITDLSFQKKV LSDIARAGDA IEKLYGTAQD1380
 1381 IEGVIRDGKL YVVQTRPQV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] deduced N/A No confident structure predictions are available.
    2 View Details [200..320] MSA 1.011996 View MSA. No confident structure predictions are available.
    3 View Details [321..529] deduced N/A No confident structure predictions are available.
    4 View Details [530..595] MSA 1.025995 View MSA. No confident structure predictions are available.
    5 View Details [596..689] deduced N/A No confident structure predictions are available.
    6 View Details [690..808] deduced N/A No confident structure predictions are available.
    7 View Details [809..1076] deduced N/A No confident structure predictions are available.
    8 View Details [1077..1399] PSI-BLAST 89.30103 No description for 2olsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle