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Protein Overview: gi|167467675

General Information:
Name(s) found: gi|167467675 [NCBI NR]
Description(s) found:
  • gi|167467675|ref|ZP_02332379.1| glycine cleavage system T protein [Yersinia pestis FV-1] [NCBI NR]
    • Organism: Yersinia pestis FV-1
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQTPLYDQ HVACGARMVD FHGWMMPLHY GSQIDEHHFV RQDAGMFDVS HMTIVDLHGN  60
   61 RTREFLRYLL ANDVAKLTQP GKALYTGMLN ESGGVIDDLI VYFLSEDYFR LVVNSATRDK 120
  121 DLAWISQHAE PYQVEVTVRD DLALIAVQGP QAQQKVATLL TTEQQQAIAG MKPFFGIQTG 180
  181 DLFIATTGYT GEAGYEIALP KQQVVAFWQQ LLAAGVKPAG LGARDTLRLE AGMNLYGQEM 240
  241 DEKTSPLAAN MGWTVAWQPE DRQFIGRAAL ERQRMKGTEQ LVGLIMTEKG VLRNELPVYF 300
  301 FDAAGNQHVG VITSGSFSPT LGFSIALARV PAGIGEHAVV QIRNREMPVR VTKPGFVRAG 360
  361 KAIVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 121.0 Crystal structure of aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system (np417381) from Escherichia coli k12 at 1.70 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminomethyltransferase activity
    		•  10.5654741349554 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  5.37200252580633 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  5.37200252580633 bayes_pls_golite062009
  • methyltransferase activity
    		•  3.28983380541263 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  3.20782575104451 bayes_pls_golite062009
  • catalytic activity
    		•  1.65079399897053 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.19783690850993 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.867567984371732 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.550291785460228 bayes_pls_golite062009
  • transferase activity
    		•  0.217873555384951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle