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Protein Overview: gi|215263375, gi...

General Information:
Name(s) found: gi|215485303 [NCBI NR]
gi|215263375 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|215485303|ref|YP_002327734.1| poly(A) polymerase I [Escherichia coli O127:H6 str. E2348/69] [NCBI NR]
  • gi|215263375|emb|CAS07694.1| poly(A) polymerase I [Escherichia coli O127:H6 str. E2348/69] [NCBI NR]
    • Organism: Escherichia coli O127:H6 str. E2348/69
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSREESEAE QAVARPQVTV IPREQHAISR KDISENALKV MYRLNKAGYE AWLVGGGVRD  60
   61 LLLGKKPKDF DVTTNATPEQ VRKLFRNCRL VGRRFRLAHV MFGPEIIEVA TFRGHHEGNV 120
  121 SDRTTSQRGQ NGMLLRDNIF GSIEEDAQRR DFTINSLYYS VADFTVRDYV GGMKDLKDGV 180
  181 IRLIGNPETR YREDPVRMLR AVRFAAKLGM RISPETAEPI PRLATLLNDI PPARLFEESL 240
  241 KLLQAGYGYE TYKLLCEYHL FQPLFPTITR YFTENGDSPM ERIIEQVLKN TDTRIHNDMR 300
  301 VNPAFLFAAM FWYPLLETAQ KIAQESGLTY HDAFALAMND VLDEACRSLA IPKRLTTLTR 360
  361 DIWQLQLRMS RRQGKRAWKL LEHPKFRAAY DLLALRAEVE RNAELQRLVK WWGEFQVSAP 420
  421 PDQKGMLNEL DEEPSPRRRT RRPRKRAPRR EGTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..382] PSI-BLAST 60.0 tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain
    2 View Details [383..454] MSA 1.421996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring phosphorus-containing groups
    		•  2.13977436268217 bayes_pls_golite062009
  • RNA binding
    		•  1.95446539797934 bayes_pls_golite062009
  • transferase activity
    		•  1.58185056077551 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.28424599869932 bayes_pls_golite062009
  • catalytic activity
    		•  0.75232920999699 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  0.747086661208511 bayes_pls_golite062009
  • tRNA binding
    		•  0.671378805940772 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.56250895409788 bayes_pls_golite062009
  • binding
    		•  0.248197954076327 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle