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Protein Overview: gi|218769882, gi...

General Information:
Name(s) found: gi|218889659 [NCBI NR]
gi|218769882 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|218889659|ref|YP_002438523.1| putative thioredoxin [Pseudomonas aeruginosa LESB58] [NCBI NR]
  • gi|218769882|emb|CAW25643.1| probable thioredoxin [Pseudomonas aeruginosa LESB58] [NCBI NR]
    • Organism: Pseudomonas aeruginosa LESB58
    Length: 289 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTPYIFDV TGANFEQLVI ENSFHKPVLV DFWADWCAPC KALMPLLAQI AESYQGELLL  60
   61 AKVNCDVEQD IVMRFGIRSL PTVVLFKDGQ PVDGFAGAQP ESQIRALLEP HVKAPALPDE 120
  121 DPLEVAQALF AEGRIGDAEA TLKALLAENN ENAAALILYA RCLAERGELE EAQAILDAVK 180
  181 SDEHKQALAG ARAQLTFLRQ AADLPDSAEL KSRLAADAGD DEAAYQLAVQ QLARQQYEAA 240
  241 LDGLLKLFLR NRGYQDDLPR KTLVQVFDLL GNDHPLVTAY RRKLYQALY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] PSI-BLAST 10.522879 Crystal Structure of Thioredoxin Mutant P34H
    2 View Details [76..289] PSI-BLAST 30.522879 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.71974493738804 bayes_pls_golite062009
  • protein binding
    		•  1.6279032205159 bayes_pls_golite062009
  • soluble NSF attachment protein activity
    		•  1.23402264298006 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.02070055347338 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.01193875360949 bayes_pls_golite062009
  • DNA binding
    		•  0.80346414607277 bayes_pls_golite062009
  • hydrolase activity
    		•  0.722744548996965 bayes_pls_golite062009
  • signal sequence binding
    		•  0.49295886046194 bayes_pls_golite062009
  • transcription factor activity
    		•  0.134824164012026 bayes_pls_golite062009
  • peroxisome targeting sequence binding
    		•  0.0468412220974996 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle