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Protein Overview: gi|218354220, gi...

General Information:
Name(s) found: gi|218697488 [NCBI NR]
gi|218354220 [NCBI NR]
Description(s) found:
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  • gi|218697488|ref|YP_002405155.1| branched-chain amino acid aminotransferase [Escherichia coli 55989] [NCBI NR]
  • gi|218354220|emb|CAV00869.1| branched-chain amino-acid aminotransferase [Escherichia coli 55989] [NCBI NR]
    • Organism: Escherichia coli 55989
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKKADYIW FNGEMVRWED AKVHVMSHAL HYGTSVFEGI RCYDSHKGPV VFRHREHMQR  60
   61 LHDSAKIYRF PVSQSIDELM EACRDVIRKN NLTSAYIRPL IFVGDVGMGV NPPAGYSTDV 120
  121 IIAAFPWGAY LGAEALEQGI DAMVSSWNRA APNTIPTAAK AGGNYLSSLL VGSEARRHGY 180
  181 QEGIALDVNG YISEGAGENL FEVKDGVLFT PPFTSSALPG ITRDAIIKLA KELGIEVREQ 240
  241 VLSRESLYLA DEVFMSGTAA EITPVRSVDG IQVGEGRCGP VTKRIQQAFF GLFTGETEDK 300
  301 WGWLDQVNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 102.0 Branched-chain aminoacid aminotransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • branched-chain-amino-acid transaminase activity
    		•  5.31468228742342 bayes_pls_golite062009
  • L-alanine:2-oxoglutarate aminotransferase activity
    		•  2.72280299326621 bayes_pls_golite062009
  • alanine-oxo-acid transaminase activity
    		•  2.72280299326621 bayes_pls_golite062009
  • catalytic activity
    		•  2.42233634542616 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  2.24372201513675 bayes_pls_golite062009
  • transaminase activity
    		•  2.22194941712055 bayes_pls_golite062009
  • transferase activity
    		•  1.87055521105017 bayes_pls_golite062009
  • binding
    		•  1.1152974834671 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.92252822492163 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.92252822492163 bayes_pls_golite062009
  • D-alanine:2-oxoglutarate aminotransferase activity
    		•  0.1743062521428 bayes_pls_golite062009
  • protein binding
    		•  0.120924367164485 bayes_pls_golite062009
  • cofactor binding
    		•  0.0813158351261423 bayes_pls_golite062009
  • vitamin binding
    		•  0.0806513488943901 bayes_pls_golite062009
  • steroid binding
    		•  0.026124581502876 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle