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Protein Overview: gi|33357731

General Information:
Name(s) found: gi|33357731 [NCBI NR]
Description(s) found:
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  • gi|33357731|pdb|1OGA|D Chain D, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition [NCBI NR]
  • Chain D, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition [nrdb_11152004_Chlamydomonas]
  • Chain D, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition. [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
    • Organism: Homo sapiens
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLEQSPQF LSIQEGENLT VYCNSSSVFS SLQWYRQEPG EGPVLLVTVV TGGEVKKLKR  60
   61 LTFQFGDARK DSSLHITAAQ PGDTGLYLCA GAGSQGNLIF GKGTKLSVKP NIQNPDPAVY 120
  121 QLRDSKSSDK SVCLFTDFDS QTNVSQSKDS DVYITDKTVL DMRSMDFKSN SAVAWSNKSD 180
  181 FACANAFNNS IIPEDTFFPS PENDGGGCKH HHHHH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|33357731

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 35.154902 T-cell antigen receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.483195558859675 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle