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Protein Overview: FBpp0308621, FBp...

General Information:
Name(s) found: FBpp0308621 [FlyBase]
FBpp0298043 [FlyBase]
qkr58E-3-PB / FBpp0288693 [FlyBase]
Description(s) found:
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  • gi|2792291|gb|AAB97003.1| QKR58E-3 [Drosophila melanogaster] [NCBI NR]
  • gi|221330530|ref|NP_477306.3| quaking related 58E-3 [Drosophila melanogaster] [NCBI NR]
  • gi|220902336|gb|AAF46842.3| quaking related 58E-3 [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:complement(18297392..18297525,18297816..18297901,18298044..18298133,18298192..18298556,18298617..18298738,18298798..18298954); ID=FBpp0308621; name=qkr58E-3-PD; parent=FBgn0022984,FBtr0339538; dbxref=FlyBase:FBpp0308621,FlyBase_Annotation_IDs:CG3584-PD; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:complement(18297392..18297525,18297816..18297901,18298044..18298133,18298192..18298556,18298617..18298738,18298798..18298954); ID=FBpp0298043; name=qkr58E-3-PC; parent=FBgn0022984,FBtr0307214; dbxref=FlyBase:FBpp0298043,REFSEQ:NP_001246460,GB_protein:AFH08213,FlyBase_Annotation_IDs:CG3584-PC; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r5.56; species=Dmel; [FlyBase]
  • The gene quaking related 58E-3 is referred to in FlyBase by the symbol Dmel\qkr58E-3 (CG3584, FBgn0022984). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:18297009..18299049. It has the cytological map location 58D7-58D8. There is experimental evidence that it has the molecular function</span>: RNA binding. There is experimental evidence that it is involved in the biological process</span>: apoptosis; regulation of alternative nuclear mRNA splicing, via spliceosome. 10 alleles are reported. The phenotypes of these alleles are annotated with: egg; dorsal appendage. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • QKR58E-3 [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • (AE003457) qkr58E-3 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • type=protein; loc=2R:complement(18297392..18297525,18297816..18297901,18298044..18298133,18298192..18298556,18298617..18298738,18298798..18298954); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,F [fly-100309-contam.fasta]
  • type=protein; loc=2R:complement(18297392..18297525,18297816..18297901,18298044..18298133,18298192..18298556,18298617..18298738,18298798..18298954); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,FlyBase:FBpp0288693,REFSEQ:NP_477306,GB_protein:AAF46842; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(18297392..18297525,18297816..18297901,18298044..18298133,18298192..18298556,18298617..18298738,18298798..18298954); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,FlyBase:FBpp0288693,REFSEQ:NP_477306,GB_protein:AAF46842; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • QKR58E-3 OS=Drosophila melanogaster GN=qkr58E-3 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(18297392..18297525,18297816..18297901,18298044..18298133,18298192..18298556,18298617..18298738,18298798..18298954); ID=FBpp0298043; name=qkr58E-3-PC; parent=FBgn0022984,FBtr0307214; dbxref=FlyBase:FBpp0298043,REFSEQ:NP_001246460,GB_protein:AFH08213,FlyBase_Annotation_IDs:CG3584-PC; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(18297392..18297525,18297816..18297901,18298044..18298133,18298192..18298556,18298617..18298738,18298798..18298954); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,FlyBase:FBpp0288693,REFSEQ:NP_477306,GB_protein:AAF46842,FlyMine:FBpp0288693,modMine:FBpp0288693; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0298043; name=qkr58E-3-PC; parent=FBgn0022984,FBtr0307214; dbxref=FlyBase:FBpp0298043,REFSEQ:NP_001246460,GB_protein:AFH08213,FlyBase_Annotation_IDs:CG3584-PC; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,FlyBase:FBpp0288693,REFSEQ:NP_477306,GB_protein:AAF46842,FlyMine:FBpp0288693,modMine:FBpp0288693; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0308621; name=qkr58E-3-PD; parent=FBgn0022984,FBtr0339538; dbxref=FlyBase:FBpp0308621,FlyBase_Annotation_IDs:CG3584-PD,GB_protein:AHN56516,REFSEQ:NP_001286721; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0298043; name=qkr58E-3-PC; parent=FBgn0022984,FBtr0307214; dbxref=FlyBase:FBpp0298043,REFSEQ:NP_001246460,GB_protein:AFH08213,FlyBase_Annotation_IDs:CG3584-PC; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,FlyBase:FBpp0288693,REFSEQ:NP_477306,GB_protein:AAF46842,FlyMine:FBpp0288693,modMine:FBpp0288693; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0308621; name=qkr58E-3-PD; parent=FBgn0022984,FBtr0339538; dbxref=FlyBase:FBpp0308621,FlyBase_Annotation_IDs:CG3584-PD,GB_protein:AHN56516,REFSEQ:NP_001286721; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • QKR58E-3 OS=Drosophila melanogaster GN=qkr58E-3 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0298043 type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0298043; name=qkr58E-3-PC; parent=FBgn0022984,FBtr0307214; dbxref=FlyBase:FBpp0298043,REFSEQ:NP_001246460,GB_protein:AFH08213,FlyBase_Annotation_IDs:CG3584-PC; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0288693 type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,FlyBase:FBpp0288693,REFSEQ:NP_477306,GB_protein:AAF46842,FlyMine:FBpp0288693,modMine:FBpp0288693; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0308621 type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0308621; name=qkr58E-3-PD; parent=FBgn0022984,FBtr0339538; dbxref=FlyBase:FBpp0308621,FlyBase_Annotation_IDs:CG3584-PD,GB_protein:AHN56516,REFSEQ:NP_001286721; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0298043; name=qkr58E-3-PC; parent=FBgn0022984,FBtr0307214; dbxref=FlyBase:FBpp0298043,REFSEQ:NP_001246460,GB_protein:AFH08213,FlyBase_Annotation_IDs:CG3584-PC,UniProt/TrEMBL:O44434; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0288693; name=qkr58E-3-PB; parent=FBgn0022984,FBtr0290254; dbxref=FlyBase_Annotation_IDs:CG3584-PB,FlyBase:FBpp0288693,REFSEQ:NP_477306,GB_protein:AAF46842,UniProt/TrEMBL:O44434,FlyMine:FBpp0288693,modMine:FBpp0288693; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(22411293..22411449,22411112..22411233,22410687..22411051,22410539..22410628,22410311..22410396,22409887..22410020)); ID=FBpp0308621; name=qkr58E-3-PD; parent=FBgn0022984,FBtr0339538; dbxref=FlyBase:FBpp0308621,FlyBase_Annotation_IDs:CG3584-PD,GB_protein:AHN56516,REFSEQ:NP_001286721,UniProt/TrEMBL:O44434; MD5=ec68028f5cb30852c7f38ee4c768e5dd; length=317; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 317 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of alternative nuclear mRNA splicing, via spliceosome [IMP]
    apoptosis [IGI][IMP][IPI]
    Molecular Function: RNA binding [IDA]
    mRNA binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METPSEFTEK QPPTHDHQPR LNEVAQKFLA DLDEERQRLS ADFPLCALLI DEAVDRVYCT  60
   61 GRIPGKEFYA DVYKQKPMKI TQKVFVPVKQ YPKFNFTGKI LGPKGNSLRR LQEETQCKIA 120
  121 IKGRSSIRDR NKEEQLRSTG DPRYAHLQKD LFLEVSTVAT PAECYARIAY ALAEIRKYLI 180
  181 PDKNDEVSHE QLRELMEMDP ESAKNIHGPN LEAYRSVFDK KFGGNSNGAP KYINLIKRAA 240
  241 ENPPEVDDVE EVAYEYEHRM PPKRPPTGYE YSKPRPSIIP TNAAAYKRPY PTDMKRMREP 300
  301 PIKSYKPNPY TILKKYK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle