YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FAR1_ARATH

General Information:
Name(s) found: FAR1_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 827 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to red or far red light [IMP]
    response to far red light [IMP]
    red or far-red light signaling pathway [IMP]
    far-red light signaling pathway [IMP]
    Molecular Function: transcription factor activity [IDA]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQENLVSD AGDDHMVDIV VEPHSNRDIG IVDEFNIGGD VGFSGDLDLE PRNGIDFDTH  60
   61 EAAYIFYQEY AKSMGFTTSI KNSRRSKKTK DFIDAKFACS RYGVTPESES SGSSSRRSTV 120
  121 KKTDCKASMH VKRRPDGKWI IHEFVKDHNH ELLPALAYHF RIQRNVKLAE KNNIDILHAV 180
  181 SERTKKMYVE MSRQSGGYKN IGSLLQTDVS SQVDKGRYLA LEEGDSQVLL EYFKRIKKEN 240
  241 PKFFYAIDLN EDQRLRNLFW ADAKSRDDYL SFNDVVSFDT TYVKFNDKLP LALFIGVNHH 300
  301 SQPMLLGCAL VADESMETFV WLIKTWLRAM GGRAPKVILT DQDKFLMSAV SELLPNTRHC 360
  361 FALWHVLEKI PEYFSHVMKR HENFLLKFNK CIFRSWTDDE FDMRWWKMVS QFGLENDEWL 420
  421 LWLHEHRQKW VPTFMSDVFL AGMSTSQRSE SVNSFFDKYI HKKITLKEFL RQYGVILQNR 480
  481 YEEESVADFD TCHKQPALKS PSPWEKQMAT TYTHTIFKKF QVEVLGVVAC HPRKEKEDEN 540
  541 MATFRVQDCE KDDDFLVTWS KTKSELCCFC RMFEYKGFLC RHALMILQMC GFASIPPQYI 600
  601 LKRWTKDAKS GVLAGEGADQ IQTRVQRYND LCSRATELSE EGCVSEENYN IALRTLVETL 660
  661 KNCVDMNNAR NNITESNSQL NNGTHEEENQ VMAGVKATKK KTVYRKRKGQ QEASQMLESQ 720
  721 QSLQPMETIS SEAMDMNGYY GPQQNVQGLL NLMEPPHEGY YVDQRTIQGL GQLNSIAPAQ 780
  781 DSFFTNQQAM SGMVGQIDFR PPPNFTYTLQ EEHLSSAQLP GSSSRQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] Pfam 39.958607 No description for PF03101.7 was found. No confident structure predictions are available.
    2 View Details [147..241] deduced N/A No confident structure predictions are available.
    3 View Details [242..379] Pfam 31.744727 No description for PF10551.1 was found. No confident structure predictions are available.
    4 View Details [380..594] MSA 3.654987 View MSA. No confident structure predictions are available.
    5 View Details [595..680] deduced N/A No confident structure predictions are available.
    6 View Details [681..827] MSA 8.354997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle