YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FAR1_ARATH
Organism: Arabidopsis thaliana
Length: 827 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for FAR1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQENLVSD AGDDHMVDIV VEPHSNRDIG IVDEFNIGGD VGFSGDLDLE PRNGIDFDTH  60
   61 EAAYIFYQEY AKSMGFTTSI KNSRRSKKTK DFIDAKFACS RYGVTPESES SGSSSRRSTV 120
  121 KKTDCKASMH VKRRPDGKWI IHEFVK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.958607
Match: PF03101.7
Description: No description for PF03101.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHNHELLPAL AYHFRIQRNV KLAEKNNIDI LHAVSERTKK MYVEMSRQSG GYKNIGSLLQ  60
   61 TDVSSQVDKG RYLALEEGDS QVLLEYFKRI KKENP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KFFYAIDLNE DQRLRNLFWA DAKSRDDYLS FNDVVSFDTT YVKFNDKLPL ALFIGVNHHS  60
   61 QPMLLGCALV ADESMETFVW LIKTWLRAMG GRAPKVILTD QDKFLMSAVS ELLPNTRHCF 120
  121 ALWHVLEKIP EYFSHVMK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.744727
Match: PF10551.1
Description: No description for PF10551.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [380-594]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHENFLLKFN KCIFRSWTDD EFDMRWWKMV SQFGLENDEW LLWLHEHRQK WVPTFMSDVF  60
   61 LAGMSTSQRS ESVNSFFDKY IHKKITLKEF LRQYGVILQN RYEEESVADF DTCHKQPALK 120
  121 SPSPWEKQMA TTYTHTIFKK FQVEVLGVVA CHPRKEKEDE NMATFRVQDC EKDDDFLVTW 180
  181 SKTKSELCCF CRMFEYKGFL CRHALMILQM CGFAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [595-680]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPPQYILKRW TKDAKSGVLA GEGADQIQTR VQRYNDLCSR ATELSEEGCV SEENYNIALR  60
   61 TLVETLKNCV DMNNARNNIT ESNSQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [681-827]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNGTHEEENQ VMAGVKATKK KTVYRKRKGQ QEASQMLESQ QSLQPMETIS SEAMDMNGYY  60
   61 GPQQNVQGLL NLMEPPHEGY YVDQRTIQGL GQLNSIAPAQ DSFFTNQQAM SGMVGQIDFR 120
  121 PPPNFTYTLQ EEHLSSAQLP GSSSRQL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle