YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PEN1_ARATH

General Information:
Name(s) found: PEN1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • Arabidiol synthase OS=Arabidopsis thaliana GN=PEN1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 766 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricyclic triterpenoid biosynthetic process [IDA]
    Molecular Function: arabidiol synthase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRLRIGAKA GNDTHLFTTN NYVGRQIWEF DANAGSPQEL AEVEEARRNF SNNRSHYKAS  60
   61 ADLLWRMQFL REKGFEQKIP RVRVEDAAKI RYEDAKTALK RGLHYFTALQ ADDGHWPADN 120
  121 SGPNFFIAPL VICLYITGHL EKIFTVEHRI ELIRYMYNHQ NEDGGWGLHV ESPSIMFCTV 180
  181 INYICLRIVG VEAGHDDDQG STCTKARKWI LDHGGATYTP LIGKACLSVL GVYDWSGCKP 240
  241 MPPEFWFLPS SFPINGGTLW IYLRDIFMGL SYLYGKKFVA TPTPLILQLQ EELYPEPYTK 300
  301 INWRLTRNRC AKEDLCYPSS FLQDLFWKGV HIFSESILNR WPFNKLIRQA ALRTTMKLLH 360
  361 YQDEANRYIT GGSVPKAFHM LACWVEDPEG EYFKKHLARV SDFIWIGEDG LKIQSFGSQL 420
  421 WDTVMSLHFL LDGVEDDVDD EIRSTLVKGY DYLKKSQVTE NPPSDHIKMF RHISKGGWTF 480
  481 SDKDQGWPVS DCTAESLKCC LLFERMPSEF VGQKMDVEKL FDAVDFLLYL QSDNGGITAW 540
  541 EPADGKTWLE WFSPVEFVQD TVIEHEYVEC TGSAIVALTQ FSKQFPEFRK KEVERFITNG 600
  601 VKYIEDLQMK DGSWCGNWGV CFIYGTLFAV RGLVAAGKTF HNCEPIRRAV RFLLDTQNQE 660
  661 GGWGESYLSC LRKKYTPLAG NKTNIVSTGQ ALMVLIMGGQ MERDPLPVHR AAKVVINLQL 720
  721 DNGDFPQQEV MGVFNMNVLL HYPTYRNIYS LWALTLYTQA LRRLQP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..766] PSI-BLAST 1000.0 Structure of human OSC in complex with Lanosterol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • lanosterol synthase activity
    		•  3.72954210081462 bayes_pls_golite062009
  • oxidosqualene cyclase activity
    		•  3.70516211286781 bayes_pls_golite062009
  • prenyltransferase activity
    		•  3.525366989371 bayes_pls_golite062009
  • isoprenoid binding
    		•  1.59014951619756 bayes_pls_golite062009
  • binding
    		•  0.663474225223042 bayes_pls_golite062009
  • protein prenyltransferase activity
    		•  0.55742738134604 bayes_pls_golite062009
  • catalytic activity
    		•  0.497699107100544 bayes_pls_golite062009
  • protein binding
    		•  0.172880799019885 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle