| Protein: | PEN1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 766 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEN1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1016.0 | [0..1] | [761..1] |
|
Region A: Residues: [1-766] |
1 11 21 31 41 51
| | | | | |
1 MWRLRIGAKA GNDTHLFTTN NYVGRQIWEF DANAGSPQEL AEVEEARRNF SNNRSHYKAS 60
61 ADLLWRMQFL REKGFEQKIP RVRVEDAAKI RYEDAKTALK RGLHYFTALQ ADDGHWPADN 120
121 SGPNFFIAPL VICLYITGHL EKIFTVEHRI ELIRYMYNHQ NEDGGWGLHV ESPSIMFCTV 180
181 INYICLRIVG VEAGHDDDQG STCTKARKWI LDHGGATYTP LIGKACLSVL GVYDWSGCKP 240
241 MPPEFWFLPS SFPINGGTLW IYLRDIFMGL SYLYGKKFVA TPTPLILQLQ EELYPEPYTK 300
301 INWRLTRNRC AKEDLCYPSS FLQDLFWKGV HIFSESILNR WPFNKLIRQA ALRTTMKLLH 360
361 YQDEANRYIT GGSVPKAFHM LACWVEDPEG EYFKKHLARV SDFIWIGEDG LKIQSFGSQL 420
421 WDTVMSLHFL LDGVEDDVDD EIRSTLVKGY DYLKKSQVTE NPPSDHIKMF RHISKGGWTF 480
481 SDKDQGWPVS DCTAESLKCC LLFERMPSEF VGQKMDVEKL FDAVDFLLYL QSDNGGITAW 540
541 EPADGKTWLE WFSPVEFVQD TVIEHEYVEC TGSAIVALTQ FSKQFPEFRK KEVERFITNG 600
601 VKYIEDLQMK DGSWCGNWGV CFIYGTLFAV RGLVAAGKTF HNCEPIRRAV RFLLDTQNQE 660
661 GGWGESYLSC LRKKYTPLAG NKTNIVSTGQ ALMVLIMGGQ MERDPLPVHR AAKVVINLQL 720
721 DNGDFPQQEV MGVFNMNVLL HYPTYRNIYS LWALTLYTQA LRRLQP
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1w6kA |
| Description: | Structure of human OSC in complex with Lanosterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| lanosterol synthase activity | 3.72954210081462 | bayes_pls_golite062009 |
| oxidosqualene cyclase activity | 3.70516211286781 | bayes_pls_golite062009 |
| prenyltransferase activity | 3.525366989371 | bayes_pls_golite062009 |
| isoprenoid binding | 1.59014951619756 | bayes_pls_golite062009 |
| binding | 0.663474225223042 | bayes_pls_golite062009 |
| protein prenyltransferase activity | 0.55742738134604 | bayes_pls_golite062009 |
| catalytic activity | 0.497699107100544 | bayes_pls_golite062009 |
| protein binding | 0.172880799019885 | bayes_pls_golite062009 |
