YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HEN1_ARATH

General Information:
Name(s) found: HEN1_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • Small RNA 2'-O-methyltransferase OS=Arabidopsis thaliana GN=HEN1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 942 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: virus induced gene silencing [IMP]
    specification of floral organ identity [IMP]
    regulation of flower development [IMP]
    production of miRNAs involved in gene silencing by miRNA [IMP][NAS]
    mRNA cleavage involved in gene silencing by miRNA [IMP]
    production of siRNA involved in RNA interference [IGI][IMP]
    Molecular Function: RNA methyltransferase activity [IDA][IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGKHTPT PKAIIHQKFG AKASYTVEEV HDSSQSGCLG LAIPQKGPCL YRCHLQLPEF  60
   61 SVVSNVFKKK KDSEQSAAEL ALDKLGIRPQ NDDLTVDEAR DEIVGRIKYI FSDEFLSAEH 120
  121 PLGAHLRAAL RRDGERCGSV PVSVIATVDA KINSRCKIIN PSVESDPFLA ISYVMKAAAK 180
  181 LADYIVASPH GLRRKNAYPS EIVEALATHV SDSLHSREVA AVYIPCIDEE VVELDTLYIS 240
  241 SNRHYLDSIA ERLGLKDGNQ VMISRMFGKA SCGSECRLYS EIPKKYLDNS SDASGTSNED 300
  301 SSHIVKSRNA RASYICGQDI HGDAILASVG YRWKSDDLDY DDVTVNSFYR ICCGMSPNGI 360
  361 YKISRQAVIA AQLPFAFTTK SNWRGPLPRE ILGLFCHQHR LAEPILSSST APVKSLSDIF 420
  421 RSHKKLKVSG VDDANENLSR QKEDTPGLGH GFRCEVKIFT KSQDLVLECS PRKFYEKEND 480
  481 AIQNASLKAL LWFSKFFADL DVDGEQSCDT DDDQDTKSSS PNVFAAPPIL QKEHSSESKN 540
  541 TNVLSAEKRV QSITNGSVVS ICYSLSLAVD PEYSSDGESP REDNESNEEM ESEYSANCES 600
  601 SVELIESNEE IEFEVGTGSM NPHIESEVTQ MTVGEYASFR MTPPDAAEAL ILAVGSDTVR 660
  661 IRSLLSERPC LNYNILLLGV KGPSEERMEA AFFKPPLSKQ RVEYALKHIR ESSASTLVDF 720
  721 GCGSGSLLDS LLDYPTSLQT IIGVDISPKG LARAAKMLHV KLNKEACNVK SATLYDGSIL 780
  781 EFDSRLHDVD IGTCLEVIEH MEEDQACEFG EKVLSLFHPK LLIVSTPNYE FNTILQRSTP 840
  841 ETQEENNSEP QLPKFRNHDH KFEWTREQFN QWASKLGKRH NYSVEFSGVG GSGEVEPGFA 900
  901 SQIAIFRREA SSVENVAESS MQPYKVIWEW KKEDVEKKKT DL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..333] deduced N/A No confident structure predictions are available.
    3 View Details [334..447] deduced N/A No confident structure predictions are available.
    4 View Details [448..848] PSI-BLAST 14.69897 Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase
    5 View Details [849..942] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle