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Protein Overview: gi|44917469, gi|...

General Information:
Name(s) found: gi|79536755 [NCBI NR]
gi|56381941 [NCBI NR]
gi|44917469 [NCBI NR]
Description(s) found:
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  • gi|79536755|ref|NP_200127.2| heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|56381941|gb|AAV85689.1| At5g53150 [Arabidopsis thaliana] [NCBI NR]
  • gi|44917469|gb|AAS49059.1| At5g53150 [Arabidopsis thaliana] [NCBI NR]
  • At5g53150 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Similar to DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | heat shock protein binding / unfolded protein binding | chr5:21572161-21574428 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:21554935-21557202 FORWARD LENGTH=726 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g53150 OS=Arabidopsis thaliana GN=At5g53150 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 726 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT  60
   61 FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC KGAEGAFNLV AEAWALLSDK 120
  121 DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP 180
  181 AARMDRSRTG SPAFVYPTQE SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK 240
  241 TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS 300
  301 RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR 360
  361 HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN PTEGEKNSTK AMSSKASEVE 420
  421 RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD 480
  481 GMPRFYARIQ KVISVNPFKL KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT 540
  541 LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT 600
  601 EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE 660
  661 GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN EESEALKENE ESEAVKENEE 720
  721 VGMDLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] PSI-BLAST 4.09691 Designed protein cTPR2
    2 View Details [65..154] PSI-BLAST 20.0 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [155..407] PSI-BLAST 29.09691 The crystal structure of Hsp40 Ydj1
    4 View Details [408..479] deduced N/A No confident structure predictions are available.
    5 View Details [480..726] MSA 2.039952 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle