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Protein Overview: UBP25_ARATH

General Information:
Name(s) found: UBP25_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 661 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: ubiquitin-specific protease activity [ISS]
    ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFKLQMSWM PSLLSQKRRN GPPLGLRNLG NTCYLNSVLQ CLTFTPPLAN FCLTHKHSSH  60
   61 CDTYVDGERK RDCPFCIVEK RIARSLSVDL TTDAPNKISS CLKIFAEHFK LGRQEDAHEF 120
  121 LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM 180
  181 DISLEILQSS SVKESLQKFF QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK 240
  241 RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK 300
  301 DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE 360
  361 TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP KPRAEQAPLE DNLLSSKVEK 420
  421 APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF 480
  481 GTENGGNGVK ENGSAPGSSN HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP 540
  541 ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK 600
  601 VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY 660
  661 S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 80.39794 No description for 2gfoA was found.
    2 View Details [351..415] deduced N/A No confident structure predictions are available.
    3 View Details [416..661] MSA 11.230997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle