General Information: |
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Name(s) found: |
XRN3_ARATH
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Arabidopsis thaliana |
Length: | 1020 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA]
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Biological Process: |
miRNA catabolic process
[IMP]
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Molecular Function: |
5'-3' exoribonuclease activity
[IGI][ISS]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MGVPSFYRWL AEKYPLLVAD VIEEEPVEIE GIKIPVDTSK PNPNNLEYDN LYLDMNGIIH 60 61 PCFHPEDRPS PTTFEEVFQC MFDYIDRLFV MVRPRKLLYM AIDGVAPRAK MNQQRSRRFR 120 121 SAKDASDAAA EEERLREEFE REGRRLPPKV DSQVFDSNVI TPGTEFMGVL SIALQYYVHL 180 181 RLNHDVGWKN IKVILSDANV PGEGEHKIMS YIRLQRNLPG FDPNTRHCLY GLDADLIMLG 240 241 LATHEVHFSI LREVVYTPGQ QERCFLCGQM GHFASNCEGK PKKRAGESDE KGDGNDFVKK 300 301 PYQFLHIWVL REYLELEMRI PNPPFEIDLE RIVDDFIFIC FFVGNDFLPH MPTLEIREGA 360 361 INLLMAVYKK EFRSFDGYLT DGCKPNLKRV EQFIQAVGSF EDKIFQKRAM QHQRQAERVK 420 421 RDKAGKATKR MDDEAPTVQP DLVPVARFSG SRLASAPTPS PFQSNDGRSA PHQKVRRLSP 480 481 GSSVGAAIVD VENSLESDER ENKEELKTKL KELIREKSDA FNSDTTEEDK VKLGQPGWRE 540 541 RYYEEKFSVV TPEEMERVRK DVVLKYTEGL CWVMHYYMEG VCSWQWFYPY HYAPFASDLK 600 601 DLGEMDIKFE LGTPFKPFNQ LLGVFPAASS HALPERYRTL MTDPNSPIID FYPTDFEVDM 660 661 NGKRFSWQGI AKLPFIDERR LLEAVSEVEF TLTDEEKRRN SRMCDMLFIA TSHRLAELVF 720 721 SLDNHCRQLS ARERVDFKVK IKPKLSDGMN GYLTPCSGET HPPVFRSPME GMEDILTNQV 780 781 ICCIYRLPDA HEHITRPPPG VIFPKKTVDI GDLKPPPALW HEDNGRRPMH NNHGMHNNHG 840 841 MHNNQGRQNP PGSVSGRHLG NAAHRLVSNS LQMGTDRYQT PTDVPAPGYG YNPPQYVPPI 900 901 PYQHGGYMAP PGAQGYAQPA PYQNRGGYQP RGPSGRFPSE PYQSQSREGQ HASRGGGYSG 960 961 NHQNQHQQQQ WHGQGGSEQN NPRGYNGQHH HQQGGDHDRR GRGRGSHHHH DQGGNPRHRY1020 1021 |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..161] | 3.108967 | View MSA. No confident structure predictions are available. | |
2 | View Details | [162..403] | N/A | No confident structure predictions are available. | |
3 | View Details | [404..526] | N/A | No confident structure predictions are available. | |
4 | View Details | [527..672] | 1.093948 | View MSA. No confident structure predictions are available. | |
5 | View Details | [673..1020] | 25.221849 | No description for 1y0fB was found. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)