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Protein Overview: gi|15220379

General Information:
Name(s) found: gi|15220379 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|15220379|ref|NP_172609.1| agenet domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 604 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQMIFIRKD DKVEVFSEEE ELKGSYYRAI LEDNPTKSGH NKLKVRYLTQ LNEHRLAPLT  60
   61 EFVDQRFIRP VPSEDVNDGV VFVEGLMVDA YLKDGWWTGV VVKTMEDEKF LVYFDCPPDI 120
  121 IQFEKKKLRV HLDWTGFKWI RPDNKELVKS VFSCGTMVEL RFDCAWIPVI VIKELEKDKR 180
  181 FLVKYWNKSY SCRESKNLIV DSLRLRPMQP PLSVGKYELL DHVEAFSGFE WRQGVVRGIV 240
  241 FEGRYMVSFG ATKEASQFNH SDIRPPMEWE DGVWHKRTKP KRQKETSLDG NRNVQTKEPP 300
  301 GNEMADDVKK ESGLPITLGV TATKNKTQGK VSPVPMKNGF GNESTREKMP EEPKIKYYTR 360
  361 KRKRGGLKLN SYINKTVLSS DRTPNVVKNS ASNAEENHAK HTIMVLPFAK KSPVWKTYES 420
  421 LEVFKSVSHS LHFSPLFETK QDFREGYAIG MMVTYFGLLE KFKDLEADVP VSQLNSLKDS 480
  481 FSELEKHGFN VTTPLSRIDK LLALKDRQLY IMEELKGFDK EMTNEFSKAK QEFDDMEQKI 540
  541 LEVKHKIIEL QRQEAALKEQ KEAEKEQKDA AWKKICQMES CAKDLNVELE DVEFEFETIL 600
  601 SAPW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] FFAS03 2.41 Structure of the N-terminal domain of Fragile X Mental Retardation Protein
    2 View Details [155..240] Pfam 8.537602 No description for PF05641.3 was found. No confident structure predictions are available.
    3 View Details [241..604] PSI-BLAST 28.39794 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle