| Protein: | gi|15220379 |
| Organism: | Arabidopsis thaliana |
| Length: | 604 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15220379.
| Description | E-value | Query Range |
Subject Range |
|
|
400.0 | [0..1] | [604..1] |
|
|
234.0 | [0..6] | [280..24] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MEQMIFIRKD DKVEVFSEEE ELKGSYYRAI LEDNPTKSGH NKLKVRYLTQ LNEHRLAPLT 60
61 EFVDQRFIRP VPSEDVNDGV VFVEGLMVDA YLKDGWWTGV VVKTMEDEKF LVYFDCPPDI 120
121 IQFEKKKLRV HLDWTGFKWI RPDNKELVKS VFSC
|
| Detection Method: |  |
| Confidence: | 2.41 |
| Match: | 2bkdN |
| Description: | Structure of the N-terminal domain of Fragile X Mental Retardation Protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [155-240] |
1 11 21 31 41 51
| | | | | |
1 GTMVELRFDC AWIPVIVIKE LEKDKRFLVK YWNKSYSCRE SKNLIVDSLR LRPMQPPLSV 60
61 GKYELLDHVE AFSGFEWRQG VVRGIV
|
| Detection Method: | |
| Confidence: | 8.537602 |
| Match: | PF05641.3 |
| Description: | No description for PF05641.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [241-604] |
1 11 21 31 41 51
| | | | | |
1 FEGRYMVSFG ATKEASQFNH SDIRPPMEWE DGVWHKRTKP KRQKETSLDG NRNVQTKEPP 60
61 GNEMADDVKK ESGLPITLGV TATKNKTQGK VSPVPMKNGF GNESTREKMP EEPKIKYYTR 120
121 KRKRGGLKLN SYINKTVLSS DRTPNVVKNS ASNAEENHAK HTIMVLPFAK KSPVWKTYES 180
181 LEVFKSVSHS LHFSPLFETK QDFREGYAIG MMVTYFGLLE KFKDLEADVP VSQLNSLKDS 240
241 FSELEKHGFN VTTPLSRIDK LLALKDRQLY IMEELKGFDK EMTNEFSKAK QEFDDMEQKI 300
301 LEVKHKIIEL QRQEAALKEQ KEAEKEQKDA AWKKICQMES CAKDLNVELE DVEFEFETIL 360
361 SAPW
|
| Detection Method: | |
| Confidence: | 28.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
