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Protein Overview: XRCC1_ARATH

General Information:
Name(s) found: XRCC1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • DNA-repair protein XRCC1 OS=Arabidopsis thaliana GN=XRCC1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 353 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: DNA repair [ISS]
    Molecular Function: transcription coactivator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKRNLPSW MSSRDPEITP SKSHCKKPKD EGPTEEHNSR NAPSNKSEHA EPSSNTTEFS  60
   61 KLMEGVVFVL SGFVNPERST LRSQALTMGA TYQPDWNAGS TLLICAFPNT PKFRQVETNG 120
  121 GTIISKEWIT ECYAQKKLVD IEQYLMHAGK PWRKSSSPQD ANREKREHLS KKPEKQVEKK 180
  181 TETRGTPSTS SKNRSACNLV KEPFFVTEVK KWARDDLSQT ISWLESQEEK PEPGEIKRIA 240
  241 AEGVLTCLQD AIDSLEQKQD IGSVTELWSF VPRVVKELGK MESSSKKENS TASKEEVCKQ 300
  301 AKSWKKIYEA ELAKPGEDES TSRVACGYDS DMTVEMTEEE IELAYRNVSL ECL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] PSI-BLAST 20.39794 No description for 2d8mA was found.
    2 View Details [151..353] MSA 3.395997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle