YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PMTT_ARATH

General Information:
Name(s) found: PMTT_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana GN=QUA2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 684 amino acids

    Gene Ontology:
    Cellular Component: Golgi apparatus [IDA]
    Biological Process: root development [IMP]
    shoot development [IMP]
    response to cytokinin stimulus [IMP]
    homogalacturonan biosynthetic process [IMP]
    Molecular Function: methyltransferase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMPLQRGIS GVRVSDSSDD LRDSQMKDKT ERARSTENNN LTLRFPFGFL FSNQSSSKHG  60
   61 GGGENGFSAD PYSARSRHRL MLLFLKISLV LIVVIALAGS FWWTISISTS SRGHVYHNYR 120
  121 RLQEQLVSDL WDIGEISLGP NRWKELEYCN IESENFVPCF NVSENLALGY SNGDENDRFC 180
  181 GPGSKQECLE LPPVKYRVPL RWPTGKDIIW HSNVKITAQE VVSSGSITKR MMMMEDDQIS 240
  241 FRSASPMSDE VEDYSHQIAE MIGIKKDNFI EAGVRTILDI GCGYGSFGAH LLSKQILTMC 300
  301 IANYEASGSQ VQLTLERGLP AMIGSFISKQ LPYPSLSFDM LHCLRCGIDW DQKDGLLLVE 360
  361 IDRVLKPGGY FVWTSPLTNP RNKDHLKRWN FVHDFAESIC WTLLNQQDET VVWKKTINTK 420
  421 CYSSRKPGVG PSVCTKGHDV ESPYYRPLQM CIGGTRSRRW IPIEGRTRWP SRSNMNKTEL 480
  481 SLYGLHPEVL GEDAENWKIT VREYWSLLSP LIFSDHPKRP GDEDPSPPYN MLRNVLDMNA 540
  541 QFGGLNSALL EARKSVWVMN VVPTAGPNHL PMILDRGFVG VLHNWCEPFP TYPRTYDLVH 600
  601 ADNLLSLQTS QPRKTCLLID IFTEIDRLLR PEGWVIIRDT AQLVEKARET ITQLKWEARV 660
  661 IEVESSSEQR LLICQKPFTK RQSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..332] PSI-BLAST 9.045757 Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase
    2 View Details [333..516] PSI-BLAST 13.69897 No description for 2gh1A was found.
    3 View Details [517..684] FFAS03 3.93 No description for 2pxxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle