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Protein Overview: gi|42572007

General Information:
Name(s) found: gi|42572007 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|42572007|ref|NP_974094.1| ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5); carbohydrate binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGASSVSSI CSSNVSLIPT GPQVFINFRG KDLRKGFMSF LKPALKKEKI NVFIDEQEER  60
   61 GKYLISLFDT IGESKIALVI FSEGYCESHW CMDELVKIKE YMDQNRLIII PIFYRLDLDV 120
  121 VKDLTGKFGD NFWDLVDKYQ PEPKKLHKWT EALFSVCELF SLILPKHSDI SDRDFVKSIV 180
  181 KAVKKVQKNF FQRRNGEIEY QDFSVPACKL TITMHESPNE EAVQVTVLNE FYQMKNQSPV 240
  241 PSYEFKFWVD LTRPKGNVFM IDARDLSIAW SEDSNHWTWL PLPNQNSNDG NCIFEKC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] PSI-BLAST 3.522879 Toll-like receptor 1, TLR1
    2 View Details [107..168] MSA 4.294996 View MSA. No confident structure predictions are available.
    3 View Details [169..297] MSA 160.377997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle