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Protein Overview: gi|30696235

General Information:
Name(s) found: gi|30696235 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30696235|ref|NP_176121.2| SAB (SABRE) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 2603 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASPAKFFF GFLIVSIVLW MIFILCSRLF AWMLSRVLGA SVVFRVGGWK CLKDVVVKFK  60
   61 KGAIESVSAS EIKLSLRQSL VKLGVGFLSR DPKVQVLISD LEVVMRSSTS TTNLQKAKSH 120
  121 KPRTSGRGKW MVVANVARFL SVSVADMVVK TTKVIVEVKE LKLDINKDGG TKPNLYVKLN 180
  181 VLPILVHLCE SRIISDQSSN VSFECCPASQ ASSASPDRSA ATLFCDELSL SSEFGHDRAV 240
  241 GIVVRNVEVT SGDVILNFDE DSFPKSKQSS ASLRSDEVRT SATAASSAKK PHKEHQLVAA 300
  301 LAKYSSSFPE KVSFSLPKLD VRCVNREHDL LAENNITGIQ LRSVKSKSFE DTGESTRLDV 360
  361 QMELSEIHVF READSSILEI MKVDVVSFIY IPVQPVLPIR AEVDIKLGGT RCNLFISRLQ 420
  421 PWLRLHFLKK KKLVLQEKTH NLEKTKAADM KAIMWTGTVS APEMTVMLYG TEDIPLYHSS 480
  481 HVFANNVSSL GTAVHVELGE LNLHLADEYQ ECFREHLFGI EPNSGSLMHI AKVSLDWGRR 540
  541 DRTSSDEVGF RSKLVLSVDV TGMGIYFSFK RVQSLIINAL SFKALFKTLS VTGKKMNKTV 600
  601 SVQPSKGSGK GTRLVNINLE RCCVNFCDDT GLDNTVIDDP KSVNYGSQGG RVSFSSLADG 660
  661 TPRTASILST APEACKRLKY SVSLEISQFS FCLNKDKLST QMELGRAKSI YQEYLEEHTP 720
  721 CSNVILFDMH NAKLVRRSGG LNEIDVCSLF SATHISLGWE PDVHLSFYEL FLRLRSLVYA 780
  781 QRHKEPESGC NKGISSVKDG GPSEKINQSN SVNKQKKKES MFAIDVETLT ISAEVGDGVE 840
  841 VKLEAQSIFS ENACIGVLLE GLMLAFNGSR VFKTTRMQVS RIPTATNLSD AVPVMTDGPW 900
  901 DWVVQGLDVH ICMPYKLQLR AIDDSIEEML RGLKLISVAK GKHILSGKRE SSKPKKSSPK 960
  961 FGRIKFCIRR LTADIEEEPI QGWLDEHYQL VKKEACELAV RLKFLEDLIH KAGQSPKGAE1020
 1021 TSAVLDERKM FFDGVEIDVE DPVAINKVKE EIHKRSFQSY YQACQGLAPS EGSGACREGF1080
 1081 QAGFKPSAAR TSLLSVCATD FDLSLTAVHG GDAGLIEVLK KLDPICEEND IPFSRLYGSN1140
 1141 VYLNTGSLVV QLRNYTLPLL SGTSGKCEGR IVLAQQATCF QPQISQDVFV GRWRKVKMFR1200
 1201 SASGTTPPLK TYSDLRIHFE QGEVSFGVGY EPAFADISYA FTVALRRANL SHRNPDMVQV1260
 1261 IKKERSLPWW DDMRNYVHGN ITLSFSESKW SVLATTDPYE SLDQLQIVSG PIELKQSDGR1320
 1321 VFVSAKDFKI KLSSLESLIS RHSLKVPVRA SGAAFIEAPD FNLEVTMDWD CESGNSLNHY1380
 1381 LYAFPAEGKP REKVFDPFRS TSLSLRWNFS LRPEKFHQSP SSTEHPTDVG TVYSSQDKPD1440
 1441 SIPLASPTMN LGAHDLAWIL KFWGLNYYPP HKLRSFSRWP RFGVPRAARS GNLSLDKVMT1500
 1501 EFMLRVDATP SLIKYMPWDS DDPAKGLTFN MAKLKYELCY SRGKQKYTFE CKRDALDLVY1560
 1561 QGLDLHVPKA FINKDEHPCI PGSVQVLRKS TQDALIDRVP SGKDHKRYEK HRDEGFLLSS1620
 1621 DYFTIRRQAP KADPERLLAW QEAGRRNLEM TYVRSEFENG SESDEHIRSD PSDDDGYNVV1680
 1681 IADNCQRVFV YGLKLLWTIE NRDAVWSFVG GISKAFEPPK PSPSRQYTQR KIHEENQKES1740
 1741 CPETHQGEMS RSSASPGRNL PSSPSHSIKI EKSDDIGTVE TIESEEEGTR HFMVNVIEPQ1800
 1801 FNLHSEEANG RFLLAAVSGR VLARSFHSIM RVGVEVIEQA LGTGSVKIPE CSPEMTWTRM1860
 1861 EVSVMLEHVQ AHVAPTDVDP GAGLQWLPKI RRNSPKVKRT GALLERVFMP CDMYFRYTRH1920
 1921 KGGTPDLKVK PLKELTFNSH NIIATMTSRQ FQVMLDVLTN LLFARLPKPR KSSLQCPTED1980
 1981 EDVEEEADEV VPYGVEEVEL AKINLEEKER ERKLLLDDIR KLSPCSDNMD DTHIEREGEL2040
 2041 WMISTRRSIL VQGLKKELTY AQKSRKAASA SLRMALQKAA QLRIMEKEKN KSPSYAMCIS2100
 2101 LQINKVVWSM LVDGKSFAEA EINDMIYDFD RDYKDIGVAR FTTKYFVVRN CLPNAKSDML2160
 2161 LSAWNPPPEW GKKVMLRVDA KQGAPKDAHY PLELFHVEIY PLRIHLTETM YRMMWEYFFP2220
 2221 EEEQDSQSRQ EVWKISTTAG SKRVKKGLVG HESSGHAIKD VEASRMSSSA LSASAAVQSQ2280
 2281 SNDDSVQKSN VICLRSSTGA SAQELRRTSS FDREENVAEP IANELVLQAH SCNVSSSIEQ2340
 2341 QEDFSKQKVK EIKPVKSGRS SHEEKKAGKS HEEKKSRPRK MMEFHNIKIS QVELLVTYEG2400
 2401 SRFVVNDLKL LMDTFHRVEF TGTWRRLFSR VKKHIIWGVL KSVTGMQGKK FKDKSHNNRE2460
 2461 STDNDLNLSD NDQTGKPDQQ QVTWFKRQSD GAGDGFVTSI RGLFNTQRRK AKAFVLRTMR2520
 2521 GEAENDFHGD WSDSDVEFSP FARQLTITKA KRLIRRHTKK FRPRSQRGST SQQRESLPSS2580
 2581 PIETTPFESG YSSGSSPYED FRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] deduced N/A No confident structure predictions are available.
    2 View Details [278..521] deduced N/A No confident structure predictions are available.
    3 View Details [522..648] deduced N/A No confident structure predictions are available.
    4 View Details [649..881] deduced N/A No confident structure predictions are available.
    5 View Details [882..1030] MSA 1.052976 View MSA. No confident structure predictions are available.
    6 View Details [1031..1127] deduced N/A No confident structure predictions are available.
    7 View Details [1128..1295] Pfam 4.60206 No description for PF10347.1 was found. No confident structure predictions are available.
    8 View Details [1296..1484] MSA 1.053974 View MSA. No confident structure predictions are available.
    9 View Details [1485..1677] deduced N/A No confident structure predictions are available.
    10 View Details [1678..1735] deduced N/A No confident structure predictions are available.
    11 View Details [1736..1969] deduced N/A No confident structure predictions are available.
    12 View Details [1970..2049] deduced N/A No confident structure predictions are available.
    13 View Details [2050..2293] deduced N/A No confident structure predictions are available.
    14 View Details [2294..2389] deduced N/A No confident structure predictions are available.
    15 View Details [2390..2528] MSA 1.026994 View MSA. No confident structure predictions are available.
    16 View Details [2529..2603] MSA 1.018995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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