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Protein Overview: gi|30695647

General Information:
Name(s) found: gi|30695647 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30695647|ref|NP_849806.1| oligouridylate-binding protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 430 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: mRNA 3'-UTR binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNQRLIKQQ QQQQQQQHQQ AMIQQAMMQQ HPSLYHPGVM APPQMEPLPS GNLPPGFDPT  60
   61 TCRSVYAGNI HTQVTEILLQ EIFASTGPIE SCKLIRKDKS SYGFVHYFDR RCASMAIMTL 120
  121 NGRHIFGQPM KVNWAYATGQ REDTSSHFNI FVGDLSPEVT DAALFDSFSA FNSCSSYYRD 180
  181 ARVMWDQKTG RSRGFGFVSF RNQQDAQTAI NEMNGKWVSS RQIRCNWATK GATFGEDKHS 240
  241 SDGKSVVELT NGSSEDGREL SNEDAPENNP QFTTVYVGNL SPEVTQLDLH RLFYTLGAGV 300
  301 IEEVRVQRDK GFGFVRYNTH DEAALAIQMG NAQPFLFSRQ IRCSWGNKPT PSGTASNPLP 360
  361 PPAPASVPSL SAMDLLAYER QLALAKMHPQ AQHSLRQAGL GVNVAGGTAA MYDGGYQNVA 420
  421 AAHQQLMYYQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] PSI-BLAST 38.045757 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
    2 View Details [137..251] PSI-BLAST 18.045757 No description for 2dgoA was found.
    3 View Details [252..354] PSI-BLAST 15.221849 No description for 2d9pA was found.
    4 View Details [355..430] MSA 3.458997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle