| Protein: | gi|30695647 |
| Organism: | Arabidopsis thaliana |
| Length: | 430 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30695647.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..16] | [428..50] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MQNQRLIKQQ QQQQQQQHQQ AMIQQAMMQQ HPSLYHPGVM APPQMEPLPS GNLPPGFDPT 60
61 TCRSVYAGNI HTQVTEILLQ EIFASTGPIE SCKLIRKDKS SYGFVHYFDR RCASMAIMTL 120
121 NGRHIFGQPM KVNWAY
|
| Detection Method: |  |
| Confidence: | 38.045757 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [137-251] |
1 11 21 31 41 51
| | | | | |
1 ATGQREDTSS HFNIFVGDLS PEVTDAALFD SFSAFNSCSS YYRDARVMWD QKTGRSRGFG 60
61 FVSFRNQQDA QTAINEMNGK WVSSRQIRCN WATKGATFGE DKHSSDGKSV VELTN
|
| Detection Method: | |
| Confidence: | 18.045757 |
| Match: | 2dgoA |
| Description: | No description for 2dgoA was found. |
|
Region A: Residues: [252-354] |
1 11 21 31 41 51
| | | | | |
1 GSSEDGRELS NEDAPENNPQ FTTVYVGNLS PEVTQLDLHR LFYTLGAGVI EEVRVQRDKG 60
61 FGFVRYNTHD EAALAIQMGN AQPFLFSRQI RCSWGNKPTP SGT
|
| Detection Method: | |
| Confidence: | 15.221849 |
| Match: | 2d9pA |
| Description: | No description for 2d9pA was found. |
|
Region A: Residues: [355-430] |
1 11 21 31 41 51
| | | | | |
1 ASNPLPPPAP ASVPSLSAMD LLAYERQLAL AKMHPQAQHS LRQAGLGVNV AGGTAAMYDG 60
61 GYQNVAAAHQ QLMYYQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
