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Protein Overview: gi|42562713

General Information:
Name(s) found: gi|42562713 [NCBI NR]
Description(s) found:
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  • gi|42562713|ref|NP_175684.3| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] [NCBI NR]
  • hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Hydrolase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | hydrolase, alpha/beta fold family protein | chr1:19650453-19652876 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:19646785-19649208 REVERSE LENGTH=633 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Alpha/beta-hydrolase domain-containing protein OS=Arabidopsis thaliana GN=At1g52750 PE=4 SV=1 [ARATH-contam.fasta]
  • Alpha/beta-hydrolases superfamily protein OS=Arabidopsis thaliana GN=At1g52750 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 633 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAWKSWIVA EKARRCLRTM FFVAAMTASL LASSLPVLIT VADVVVPCLI VSSITCLTCH  60
   61 SPAQHFRQYS FKTSLIDVPL VSLIRSLVII CLSWLCEDTR LAYGLYLETV MLSSFGGILL 120
  121 LLVKTCVFTV NSTLEEAKVY HLKISWGMPV LLLSSAVFGL AHVVVAYRKS CGARRKLMYH 180
  181 KIDQEAVLSC KSGFSGYKKA HRQSFTRSNC KILTFAGEFR QKSFRGTSLD REELLQPRLL 240
  241 ANADSLFIKI QGLYVHYKQR TSPSVSSFVI ISDSAAEMNA RRSRLLDKQM SNLTSQTQNS 300
  301 HFHRSYTIQP DRSSLYDPLL ASHNTTPISL FDKDGVNQIN SIKLGDDMEK DENTGIVLVH 360
  361 GFGGGVFSWR HVMGELSLQL GCRVVAYDRP GWGLTSRLIR KDWEKRNLAN PYKLESQVDL 420
  421 LLSFCSEMGF SSVILVGHDD GGLLALKAAE RMQASTSKHN ITIKGVVLIN VSLSREVVPA 480
  481 FARILLHTSL RKKHLVRPLL RTEITQLVNR RAWCDTTKLT TDITMLYKAP LCLEAWDEAL 540
  541 NEISKLSYEM ILSPQNASAL VKSIGDLPVL VVAGAEDALV PLKSSQVLAS KLTNSRLVEI 600
  601 SGCGHLPHEE CPTTLVSALG SFICRLIPKL PNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] MSA 2.007956 View MSA. No confident structure predictions are available.
    2 View Details [193..633] PSI-BLAST 68.0 Human soluble Epoxide Hydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle