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Protein Overview: gi|15218889, gi|...

General Information:
Name(s) found: gi|15218889 [NCBI NR]
gi|111074196 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|15218889|ref|NP_174226.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|111074196|gb|ABH04471.1| At1g29320 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 468 amino acids

    Gene Ontology:
    Cellular Component: CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRVIPPENL GCPPFRALTF DSLGLIKVTE ARGQERGIPT VVNTWGEMNA SRSVLAASID  60
   61 DRLRNPLLAV ARKDGNVEVI NPCNGDLHFS YSVFGDDGCS PEDNEISALH LFRKKIDDQT 120
  121 ERSCTLLTCT KKGDVSLRSV KFPDAHGNST DDASPKTWKA CGSGEILVGK VDGSENFSLF 180
  181 GGKRVEANIW DLEQCTKIWS AKCPPKNNLG IFTPTWFTSA TFLSKDDHRK FVTGTKSHQV 240
  241 RLYDISTQRR PVLSFDFRET AITSIAEDPD GHTIYVGNAS ADLASFDIRT GKLLGSFLGK 300
  301 CSGSIRSVVR HPQHQVIASC GLDRYLRVYD VKTRQLISAV FLKQHLTGLV FDSGFSGEET 360
  361 AVANTVAEAA TEEKMTIMDQ EDDETEKAPV KRKKSKKEKR SREIVFEGED DEENEDEIEK 420
  421 APVKTKKSKK EKRSREKVSE GEEKDELRSK KTREHKKKTK IVKHNQED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 66.045757 PAF-AH Holoenzyme: Lis1/Alfa2
    2 View Details [121..468] PSI-BLAST 72.0 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle