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Protein Overview: gi|42562367

General Information:
Name(s) found: gi|42562367 [NCBI NR]
Description(s) found:
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  • gi|42562367|ref|NP_174130.2| polynucleotide adenylyltransferase family protein [Arabidopsis thaliana] [NCBI NR]
  • polynucleotide adenylyltransferase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Polynucleotide adenylyltransferase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | polynucleotide adenylyltransferase family protein | chr1:9795813-9798878 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • RNA binding / nucleotidyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Polynucleotide adenylyltransferase family protein | chr1:9795826-9798891 FORWARD LENGTH=541 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • tRNA nucleotidyltransferase (CCA-adding enzyme) OS=Arabidopsis thaliana GN=At1g28090 PE=2 SV=1 [ARATH-contam.fasta]
  • Polynucleotide adenylyltransferase family protein OS=Arabidopsis thaliana GN=At1g28090 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 541 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: RNA processing [IEA][ISS]
    Molecular Function: nucleotidyltransferase activity [IEA]
    RNA binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNKLSSMAY GSFGVSSKAL VYCRPCYGSI RDLPFSLRTS TIGHCGCVGA IAAPRNVVKP  60
   61 RKEESRDFSG ARGSNKDKSM PWKKLDANEF GIQRSMIPDS TRMVLNKLKK KGFQVYLVGG 120
  121 CVRDLILDRI PKDFDVITTA ELKEVRKVFP GCQIVGRRFP ICHVYVDDII IEVSSFSTSA 180
  181 RTGKAPNKSF RRPAGCDERD YIRWKNCLQR DFTVNGLMFD PSENVVYDYI GGVEDLRNSK 240
  241 VRTVSAANLS FVEDTARILR AIRIAARLGF SLTKDVAISV KELSSSLLRL DPSRIRMEIN 300
  301 YMLAYGSAEA SLRLLWRFGL MEILLPIQAS YLVSQGFRRR DGRSNMLLSL FRNLDRLVAP 360
  361 DRPCSEFLWI GILAFHKALV DQPRDPTVVA SFCLAIYSEV SLSEAIAIAR SNSKQHNSHF 420
  421 QELSSPEKDT ADSESKISQQ VIKLAESIRS AARKLNNRDY IANAMSKYPQ APGSDMVFLS 480
  481 RLMLERVEKM FGNVRRKGNQ ERDDVPSLER RINYKSLALG DFHETRRVFA RIVFDTIYPL 540
  541 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..541] PSI-BLAST 77.30103 tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.222270543382941 bayes_pls_golite062009
  • transferase activity
    		•  0.00393984128503999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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