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Protein Overview: gi|124301010, gi...

General Information:
Name(s) found: gi|15219992 [NCBI NR]
gi|124301010 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|15219992|ref|NP_173713.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|124301010|gb|ABN04757.1| At1g23000 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 358 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metal ion transport [IEA]
    Molecular Function: metal ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS  60
   61 ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ KGQKQGSAKS GIEACKPKNG 120
  121 PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK 180
  181 KVNQKQSNHN QNTQQVMAAM RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI 240
  241 QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS 300
  301 FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] PSI-BLAST 16.39794 Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis
    2 View Details [182..358] MSA 1.458969 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle