| Protein: | gi|124301010, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 358 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124301010, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
187.0 | [0..1] | [358..1] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS 60
61 ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ KGQKQGSAKS GIEACKPKNG 120
121 PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK 180
181 K
|
| Detection Method: |  |
| Confidence: | 16.39794 |
| Match: | 1p6tA |
| Description: | Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.246147507070597 | bayes_pls_golite062009 |
|
Region A: Residues: [182-358] |
1 11 21 31 41 51
| | | | | |
1 VNQKQSNHNQ NTQQVMAAMR MRTAGKMSTG VEANEIGALM GLAGFNGATN AVNHPPNGIQ 60
61 QQLQAPPLNN VNGVTNHNLT NSNGGMMMNM NGYNNHHPMN MQSRQMMHQP QQMMYQRSSF 120
121 VPASSNGYYY NYTPSPYSYY PYYPYASDQY QQQSSHSHAT NMSSEEDAGN NNSCNIM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
