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Protein Overview: PTR9_ARATH

General Information:
Name(s) found: PTR9_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30687920|ref|NP_173670.2| proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|190576483|gb|ACE79042.1| At1g22540 [Arabidopsis thaliana] [NCBI NR]
  • gi|110738445|dbj|BAF01148.1| similar to peptide transporter [Arabidopsis thaliana] [NCBI NR]
  • Protein NRT1/ PTR FAMILY 5.10 OS=Arabidopsis thaliana GN=NPF5.10 PE=2 SV=1 [Swiss-Prot]
  • proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr1:7964191-7966211 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • similar to peptide transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Major facilitator superfamily protein | chr1:7964202-7966222 FORWARD LENGTH=557 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Probable peptide/nitrate transporter At1g22540 OS=Arabidopsis thaliana GN=At1g22540 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: oligopeptide transport [IEA][ISS]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISGAVDEA GTPLLAVTVD YRNKPAVKSS SGGWRSAGFI IGVEVAERFA YYGISSNLIT  60
   61 YLTGPLGQST AAAAANVNAW SGTASLLPLL GAFVADSFLG RFRTILAASA LYIVGLGVLT 120
  121 LSAMIPSDCK VSNLLSSCSP RFQVITFFSA LYLVALAQGG HKPCVQAFGA DQFDEKEPEE 180
  181 CKAKSSFFNW WYFGMCFGTL TTLWVLNYIQ DNLSWALGFG IPCIAMVVAL VVLLLGTCTY 240
  241 RFSIRREDQS PFVRIGNVYV AAVKNWSVSA LDVAAAEERL GLVSCSSSQQ FSFLNKALVA 300
  301 KNGSCSIDEL EEAKSVLRLA PIWLTCLVYA VVFAQSPTFF TKQGATMERS ITPGYKISPA 360
  361 TLQSFISLSI VIFIPIYDRV LIPIARSFTH KPGGITMLQR IGTGIFLSFL AMVVAALVEM 420
  421 KRLKTAADYG LVDSPDATVP MSVWWLVPQY VLFGITDVFA MVGLQEFFYD QVPNELRSVG 480
  481 LALYLSIFGI GNFLSSFMIS IIEKATSQSG QASWFANNLN QAHLDYFYWL LACLSFIGLA 540
  541 SYLYVAKSYV SKRLDTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..434] PSI-BLAST 4.69897 No description for 2gfpA was found.
    2 View Details [435..557] FFAS03 1.15 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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