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Protein Overview: gi|15222176

General Information:
Name(s) found: gi|15222176 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|15222176|ref|NP_172157.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1147 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADELMPSH RSHRTPKSGP TARKKSELDK KKRGISVDKQ KNLKAFGVKS VVHAKKAKHH  60
   61 AAEKEQKRLH LPKIDRNYGE APPFVVVVQG PPGVGKSLVI KSLVKEFTKQ NVPEVRGPIT 120
  121 IVQGKQRRFQ FVECPNDINA MVDCAKVADL ALLVVDGSYG FEMETFEFLN IMQVHGFPRV 180
  181 MGVLTHLDKF NDVKKLRKTK HHLKHRFWTE IYHGAKLFYL SGLIHGKYTP REVHNLARFV 240
  241 IVIKPQPLTW RTAHPYVLVD RLEDVTPPEK VQMDKKCDRN ITVFGYLRGC NFKKRMKVHI 300
  301 AGVGDFIVAG VTALTDPCPL PSAGKKKGLR DRDKLFYAPM SGIGDLVYDK DAVYININSH 360
  361 QVQYSKTDDG KGEPTNKGKG RDVGEDLVKS LQNTKYSVDE KLDKTFINFF GKKTSASSET 420
  421 KLKAEDAYHS LPEGSDSESQ SGDDEEDIVG NESEMKQETE IHGGRLRRKA IFKTDLNEDD 480
  481 FEEADDLELD SYDPDTYDFE EADDAESDDN EVEDGGDDSA SDSADGEPGD YQIDDKDSGN 540
  541 ISQWKAPLKE IARKKNPNLM QIVYGASSLA TPLINENHDI SDDDESDDED FFKPKGEQHK 600
  601 NLGGGLDVGY VNSEDCSKFV NYGYLKNWKE KEVCESIRDR FTTGDWSKAA LRDKNLGTGG 660
  661 EGEDDELYGD FEDLETGEKH KSHENLESGA NENEDEDAEV VERDGNNPRS QADEPGYADK 720
  721 LKEAQEITKQ RNELEYNDLD EETRIELAGF RTGTYLRLEI HNVPYEMVEF FDPCHPILVG 780
  781 GIGFGEDNVG YMQARLKKHR WHKKVLKTRD PIIVSIGWRR YQTIPVFAIE DRNGRHRMLK 840
  841 YTPEHMHCLA SFWGPLVPPN TGFVAFQNLS NNQAGFRITA TSVVLEFNHQ ARIVKKIKLV 900
  901 GTPCKIKKKT AFIKDMFTSD LEIARFEGSS VRTVSGIRGQ VKKAGKNMLD NKAEEGIARC 960
  961 TFEDQIHMSD MVFLRAWTTV EVPQFYNPLT TALQPRDKTW NGMKTFGELR RELNIPIPVN1020
 1021 KDSLYKAIER KQKKFNPLQI PKRLEKDLPF MSKPKNIPKR KRPSLEDKRA VIMEPKERKE1080
 1081 HTIIQQFQLL QHHTMKKKKA TDQKKRKEYE AEKAKNEEIN KKRRREERRD RYREEDKQKK1140
 1141 KTRRSLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] FFAS03 3.59 eIF2gamma apo
    2 View Details [350..729] PSI-BLAST 7.154902 Heavy meromyosin subfragment
    3 View Details [730..872] MSA 4.201947 View MSA. No confident structure predictions are available.
    4 View Details [873..992] deduced N/A No confident structure predictions are available.
    5 View Details [993..1071] deduced N/A No confident structure predictions are available.
    6 View Details [1072..1147] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.412582209182696 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle